Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 MIR563-201ENST00000385080 79 ntBASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 MIR1284-201ENST00000408337 120 ntBASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 AL117339.3-201ENST00000418733 162 ntBASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 AP001330.5-201ENST00000607176 411 ntBASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 AC063944.3-201ENST00000609969 533 ntBASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 AC022306.3-201ENST00000619930 550 ntBASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 MIR215-201ENST00000384858 110 ntBASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 AC105029.1-201ENST00000520250 669 ntBASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 U7.6-201ENST00000610841 64 ntBASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 AC010205.1-201ENST00000616668 449 ntBASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 AL445984.1-201ENST00000637834 659 ntBASIC-1.14□□□□□ -2.59
NUP188Q5SRE5 SNORA26.5-201ENST00000391215 123 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 MIR1285-2-201ENST00000408311 88 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 MTND4P18-201ENST00000447010 465 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AC005178.1-201ENST00000508392 440 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AC091965.4-201ENST00000607691 587 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AC016597.2-201ENST00000613256 341 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 MTND1P7-201ENST00000632801 297 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AC099786.3-201ENST00000565735 1410 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AL355994.1-201ENST00000424379 260 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AC116353.2-201ENST00000505332 712 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 SNORA25.14-201ENST00000516481 132 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AC068587.4-201ENST00000533893 186 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 MIR4752-201ENST00000579672 72 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AL359999.1-201ENST00000604513 294 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AP002802.2-201ENST00000605877 235 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AC084368.1-201ENST00000620935 65 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 AL162376.1-201ENST00000624117 175 ntBASIC-1.15□□□□□ -2.59
NUP188Q5SRE5 SNORD28B-201ENST00000390993 75 ntBASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 MTND4P3-201ENST00000417829 541 ntBASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 MRPS10P1-201ENST00000448483 130 ntBASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 RNU7-62P-201ENST00000458856 62 ntBASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 RNA5SP461-201ENST00000516451 104 ntBASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 MIR4639-201ENST00000584938 69 ntBASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 AL139418.1-201ENST00000613613 177 ntBASIC-1.16□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 SNORD87-201ENST00000364849 89 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 RNU6-769P-201ENST00000384407 104 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 MIR518F-201ENST00000384973 87 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 AC244250.2-201ENST00000418731 148 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 AC093303.1-201ENST00000514549 295 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 MIR4441-201ENST00000582623 100 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 AC006380.1-201ENST00000603598 186 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 AC245008.1-201ENST00000608123 476 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 AC245297.2-201ENST00000610119 565 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 AC013437.2-201ENST00000639587 677 ntBASIC-1.17□□□□□ -2.6
NUP188Q5SRE5 SNORA63C-201ENST00000364578 129 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 MIR558-201ENST00000384920 94 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 FCF1P9-201ENST00000412546 282 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 AL031274.1-201ENST00000450334 232 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 RPL23AP75-201ENST00000491601 451 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 RNU6-504P-201ENST00000516568 104 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 AC090572.1-201ENST00000519251 160 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 AC005776.1-201ENST00000603164 290 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 RNU6-24P-201ENST00000384440 107 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 SUMO1P3-201ENST00000439961 304 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 AL359672.1-201ENST00000442302 409 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 RNU7-73P-201ENST00000458743 63 ntBASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.18□□□□□ -2.6
NUP188Q5SRE5 RNU6-407P-201ENST00000365280 104 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 MIR204-201ENST00000385200 110 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 U8.17-201ENST00000391292 132 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 MTCYBP4-201ENST00000401524 249 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 AL117351.1-201ENST00000438864 766 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 SNORD45.4-201ENST00000516629 73 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 POLR3GP1-201ENST00000594073 261 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 ZNF299P-201ENST00000406845 1804 ntBASIC-1.19□□□□□ -2.6
NUP188Q5SRE5 SNORD38C-201ENST00000384381 69 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 RNU6-136P-201ENST00000384663 107 ntBASIC-1.2□□□□□ -2.6
NUP188Q5SRE5 RNU6-541P-201ENST00000384709 110 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms