Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 Z98949.2-201ENST00000440996 144 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 MTND2P22-201ENST00000444325 1033 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 RNU6-1132P-201ENST00000459214 107 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 MTND5P5-201ENST00000503764 376 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 AC026782.1-201ENST00000512952 449 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 RNU6-314P-201ENST00000516574 104 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 RNU6-1016P-201ENST00000516689 94 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 RNU6-1096P-201ENST00000517089 102 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 AC120024.3-201ENST00000603167 156 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 AC018462.2-201ENST00000605375 395 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 AL357075.2-201ENST00000614906 189 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 MIR3674-201ENST00000636576 68 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.43□□□□□ -2.34
FOXF1Q12946 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
FOXF1Q12946 AC023934.1-201ENST00000574529 2389 ntBASIC0.43□□□□□ -2.34
FOXF1Q12946 RNA5SP361-201ENST00000362686 118 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 Y_RNA.122-201ENST00000363331 96 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 RNU4-41P-201ENST00000364426 143 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 RNU6-1310P-201ENST00000384153 107 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 Y_RNA.450-201ENST00000384198 113 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 Y_RNA.498-201ENST00000384460 102 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 RNU6-1148P-201ENST00000410992 104 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 AL035398.1-201ENST00000430869 322 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 AC104332.1-201ENST00000440471 797 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 AC098869.1-201ENST00000481627 292 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 RNA5SP436-201ENST00000516020 115 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 RNU6-1291P-201ENST00000516591 104 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 RNU6-1116P-201ENST00000517269 99 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 AC245505.1-201ENST00000556398 224 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.42□□□□□ -2.34
FOXF1Q12946 MIR3192-201ENST00000584920 77 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 AC104465.1-201ENST00000611365 139 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 MIR6513-201ENST00000621188 64 ntBASIC0.42□□□□□ -2.34
FOXF1Q12946 RNA5SP264-201ENST00000363115 107 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 RNU6-1059P-201ENST00000363752 98 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 RNU6-454P-201ENST00000364292 107 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 Y_RNA.354-201ENST00000365448 111 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 Y_RNA.473-201ENST00000384333 102 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 Y_RNA.517-201ENST00000384551 106 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 Y_RNA.557-201ENST00000384680 107 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 RNU6-1105P-201ENST00000384774 107 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
FOXF1Q12946 AC074085.1-201ENST00000413598 418 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.41□□□□□ -2.34
FOXF1Q12946 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.41□□□□□ -2.34
FOXF1Q12946 U8.19-201ENST00000459095 133 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 U8.22-201ENST00000459141 133 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 U7.7-201ENST00000459276 60 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 RNU6-625P-201ENST00000459412 107 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 COX6CP6-201ENST00000490840 228 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 AC113410.1-201ENST00000505029 247 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 SNORA40.9-201ENST00000515895 93 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 MTND4LP26-201ENST00000518144 282 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.41□□□□□ -2.34
FOXF1Q12946 AC022616.4-201ENST00000522985 181 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.41□□□□□ -2.34
FOXF1Q12946 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.41□□□□□ -2.34
FOXF1Q12946 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.41□□□□□ -2.34
FOXF1Q12946 MIR6128-201ENST00000615528 109 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 SEPT14P17-201ENST00000617978 177 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
FOXF1Q12946 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
FOXF1Q12946 RNY1P16-201ENST00000363063 111 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 RNU4-75P-201ENST00000364621 146 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 RNU6-1335P-201ENST00000365426 107 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 AC117470.1-201ENST00000381974 330 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 RNU6-318P-201ENST00000384283 103 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 RNU6-136P-201ENST00000384663 107 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 RNA5SP475-201ENST00000410568 110 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 RPS26P5-201ENST00000418544 335 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 AL162725.1-201ENST00000435405 301 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 RPEP5-201ENST00000441137 268 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 ELOCP24-201ENST00000456370 334 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 RNU11-2P-201ENST00000516898 142 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 MIR4790-201ENST00000577799 79 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 AC025627.3-201ENST00000582078 182 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 AC012557.2-201ENST00000605919 418 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 AC103591.3-201ENST00000608684 209 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 AL008636.1-201ENST00000625038 1018 ntBASIC0.4□□□□□ -2.35
FOXF1Q12946 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
FOXF1Q12946 RNU6-874P-201ENST00000362390 105 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 RNA5SP48-201ENST00000363969 126 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 Y_RNA.358-201ENST00000365491 99 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 RNU6-510P-201ENST00000391239 108 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 MIR548K-201ENST00000408406 116 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.39□□□□□ -2.35
FOXF1Q12946 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.39□□□□□ -2.35
FOXF1Q12946 RNU6-329P-201ENST00000459618 107 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 AC116353.2-201ENST00000505332 712 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 RNU6-720P-201ENST00000516363 108 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 RNA5SP121-201ENST00000516537 101 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 RNU6-273P-201ENST00000516937 96 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 SNORA74.3-201ENST00000517108 154 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 RNU2-12P-201ENST00000517216 168 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 AC005899.2-201ENST00000584353 90 ntBASIC0.39□□□□□ -2.35
FOXF1Q12946 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.39□□□□□ -2.35
FOXF1Q12946 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms