Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MIR520G-201ENST00000385064 90 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 RNU11-3P-201ENST00000391111 133 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 RNA5SP465-201ENST00000391195 109 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 MIR1283-2-201ENST00000408621 87 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 AC099677.2-201ENST00000436385 175 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 RPS4XP11-201ENST00000446897 772 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.74□□□□□ -1.97
SSRP1Q08945 RPL23AP54-201ENST00000495129 419 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 AC234781.5-201ENST00000508429 271 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 AC046143.2-201ENST00000609789 160 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 U6.108-201ENST00000637764 58 ntBASIC2.74□□□□□ -1.97
SSRP1Q08945 RNU6-47P-201ENST00000383866 107 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 SNORA8-201ENST00000384574 139 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 MIR597-201ENST00000384968 97 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 MIR526A2-201ENST00000390198 65 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 RNU6-918P-201ENST00000391219 106 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 AL513328.1-201ENST00000446460 224 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 RNU7-120P-201ENST00000459334 63 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 MIR5688-201ENST00000580619 83 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 MIR4308-201ENST00000580634 81 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 MIR4435-1-201ENST00000582552 80 ntBASIC2.73□□□□□ -1.97
SSRP1Q08945 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.73□□□□□ -1.97
SSRP1Q08945 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSRP1Q08945 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SSRP1Q08945 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.73□□□□□ -1.97
SSRP1Q08945 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSRP1Q08945 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSRP1Q08945 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.72□□□□□ -1.97
SSRP1Q08945 Y_RNA.435-201ENST00000384095 112 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 RPS26P45-201ENST00000471748 340 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 RNA5SP24-201ENST00000516478 95 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 RNU6-1096P-201ENST00000517089 102 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 MIR4724-201ENST00000579485 89 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 AC072026.1-201ENST00000605023 201 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 FTX_2.1-201ENST00000618816 94 ntBASIC2.72□□□□□ -1.97
SSRP1Q08945 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSRP1Q08945 AC007336.1-201ENST00000576365 3828 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSRP1Q08945 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSRP1Q08945 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSRP1Q08945 MIR367-201ENST00000362299 68 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 SNORA3A-201ENST00000364113 130 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 RNU4-10P-201ENST00000364383 140 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 MIR626-201ENST00000385032 94 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 COX6CP10-201ENST00000416832 224 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.71□□□□□ -1.98
SSRP1Q08945 RNU6-437P-201ENST00000459408 95 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 AC018630.2-201ENST00000534866 2403 ntBASIC2.71□□□□□ -1.98
SSRP1Q08945 RNU6-381P-201ENST00000391259 108 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 AC007064.1-201ENST00000412238 351 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 AC009310.1-201ENST00000414414 451 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 HMGN2P3-201ENST00000433603 273 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 HMGN2P5-201ENST00000436882 273 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.7□□□□□ -1.98
SSRP1Q08945 RNU7-94P-201ENST00000459576 63 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 AC091021.1-201ENST00000468051 388 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 AL163195.1-201ENST00000496941 348 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 AC107393.1-201ENST00000512403 346 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 AC011604.1-201ENST00000545978 196 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 AC091178.2-201ENST00000584401 117 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.7□□□□□ -1.98
SSRP1Q08945 AC069114.2-201ENST00000604699 304 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 MIR6079-201ENST00000635807 62 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 ZNF271P-202ENST00000465539 1970 ntBASIC2.7□□□□□ -1.98
SSRP1Q08945 AC080100.1-201ENST00000624239 5356 ntBASIC2.69□□□□□ -1.98
SSRP1Q08945 Y_RNA.7-201ENST00000362352 102 ntBASIC2.69□□□□□ -1.98
SSRP1Q08945 RNU6-674P-201ENST00000363831 107 ntBASIC2.69□□□□□ -1.98
SSRP1Q08945 MIR562-201ENST00000384894 95 ntBASIC2.69□□□□□ -1.98
SSRP1Q08945 RNA5SP508-201ENST00000411327 119 ntBASIC2.69□□□□□ -1.98
SSRP1Q08945 AC104984.5-201ENST00000586878 94 ntBASIC2.69□□□□□ -1.98
SSRP1Q08945 AC100821.1-201ENST00000523153 2479 ntBASIC2.69□□□□□ -1.98
SSRP1Q08945 RNA5SP289-201ENST00000362332 137 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 Y_RNA.233-201ENST00000364407 101 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 Y_RNA.270-201ENST00000364693 104 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 RNU6-969P-201ENST00000383900 105 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 RNU6-209P-201ENST00000384118 107 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 Y_RNA.555-201ENST00000384673 110 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 MIR548I3-201ENST00000408378 149 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 MIR548I1-201ENST00000408810 149 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 RN7SKP164-201ENST00000516138 266 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 RNU6-341P-201ENST00000516973 96 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 MIR5007-201ENST00000583098 95 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 MIR6715A-201ENST00000615929 79 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
SSRP1Q08945 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSRP1Q08945 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSRP1Q08945 Y_RNA.24-201ENST00000362508 103 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 Y_RNA.121-201ENST00000363309 113 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 SNORA67.4-201ENST00000384688 142 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 Y_RNA.571-201ENST00000384753 98 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SSRP1Q08945 RNU6-383P-201ENST00000410864 94 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.67□□□□□ -1.98
SSRP1Q08945 TRBV12-1-201ENST00000479785 344 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.67□□□□□ -1.98
SSRP1Q08945 SNORA31.25-201ENST00000517242 134 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms