Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AL161670.1-201ENST00000554348 137 ntBASIC1.64□□□□□ -2.15
CDR2Q01850 MIR8062-201ENST00000621515 85 ntBASIC1.64□□□□□ -2.15
CDR2Q01850 RNU6-112P-201ENST00000363599 104 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 Y_RNA.176-201ENST00000363815 109 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 RNU6-1019P-201ENST00000364424 107 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.63□□□□□ -2.15
CDR2Q01850 RNU6-472P-201ENST00000384299 107 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 MIR1261-201ENST00000408659 82 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 RNU6-1203P-201ENST00000410703 110 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.63□□□□□ -2.15
CDR2Q01850 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.63□□□□□ -2.15
CDR2Q01850 MTND3P2-201ENST00000438452 342 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 AL606517.2-201ENST00000442855 241 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.63□□□□□ -2.15
CDR2Q01850 MTCO2P24-201ENST00000515611 426 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 RNU7-99P-201ENST00000516271 62 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 RNU6-1337P-201ENST00000516525 95 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 RNU6-63P-201ENST00000516690 95 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 RNU6-570P-201ENST00000517051 105 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.63□□□□□ -2.15
CDR2Q01850 AL359075.3-201ENST00000613288 217 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.63□□□□□ -2.15
CDR2Q01850 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.63□□□□□ -2.15
CDR2Q01850 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.63□□□□□ -2.15
CDR2Q01850 RNU4-90P-201ENST00000362773 141 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 RNU6-271P-201ENST00000363858 105 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 Y_RNA.483-201ENST00000384380 101 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 SNORD116-13-201ENST00000384408 92 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.62□□□□□ -2.15
CDR2Q01850 MTCYBP9-201ENST00000431021 303 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 RPS27P1-201ENST00000450552 247 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.62□□□□□ -2.15
CDR2Q01850 RNU7-172P-201ENST00000517125 64 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 RNA5SP437-201ENST00000517249 129 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 AC024995.1-201ENST00000523014 93 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.62□□□□□ -2.15
CDR2Q01850 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.62□□□□□ -2.15
CDR2Q01850 AC022217.4-201ENST00000604389 163 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 AC069114.2-201ENST00000604699 304 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 AP001282.2-201ENST00000616149 309 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 U1.36-201ENST00000620684 176 ntBASIC1.62□□□□□ -2.15
CDR2Q01850 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CDR2Q01850 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDR2Q01850 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDR2Q01850 RNU4-80P-201ENST00000363200 141 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 Y_RNA.136-201ENST00000363444 102 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 SNORA63D-201ENST00000364359 132 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 RNU6-290P-201ENST00000365212 101 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 RNA5SP190-201ENST00000365222 118 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 Y_RNA.396-201ENST00000383949 103 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 MIR1304-201ENST00000408243 91 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 RNA5SP511-201ENST00000410487 115 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 AC009310.1-201ENST00000414414 451 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 POLR2KP2-201ENST00000438155 177 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 HSPE1P13-201ENST00000451143 297 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.61□□□□□ -2.15
CDR2Q01850 RNU1-142P-201ENST00000516682 145 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 AC073413.2-201ENST00000604332 360 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 AL162730.1-201ENST00000605734 292 ntBASIC1.61□□□□□ -2.15
CDR2Q01850 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.61□□□□□ -2.15
CDR2Q01850 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
CDR2Q01850 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDR2Q01850 Y_RNA.149-201ENST00000363558 117 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 Y_RNA.310-201ENST00000365063 113 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 Y_RNA.569-201ENST00000384749 103 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 MIR515-2-201ENST00000384883 83 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 MIR515-1-201ENST00000384884 83 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 RNA5SP109-201ENST00000391010 116 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.6□□□□□ -2.15
CDR2Q01850 MTCO1P5-201ENST00000433573 344 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 SNORA70.12-201ENST00000516084 153 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 RNU6-191P-201ENST00000516295 94 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 RPL21P9-201ENST00000556149 474 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 AC015720.1-201ENST00000565251 277 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 AC022254.1-201ENST00000567857 235 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 AC010900.2-201ENST00000604508 210 ntBASIC1.6□□□□□ -2.15
CDR2Q01850 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
CDR2Q01850 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 Y_RNA.518-201ENST00000384552 113 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 RNU6-136P-201ENST00000384663 107 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 snosnR66.1-201ENST00000391095 99 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 SNORD13-201ENST00000459299 104 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 TRBVB-201ENST00000477100 408 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 RNU6-1338P-201ENST00000516328 91 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 SNORA31.17-201ENST00000516953 127 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CDR2Q01850 AC091178.2-201ENST00000584401 117 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 AC004832.4-201ENST00000608952 331 ntBASIC1.59□□□□□ -2.15
CDR2Q01850 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.59□□□□□ -2.15
CDR2Q01850 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CDR2Q01850 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CDR2Q01850 RNU6-801P-201ENST00000364087 105 ntBASIC1.58□□□□□ -2.16
CDR2Q01850 Y_RNA.237-201ENST00000364439 102 ntBASIC1.58□□□□□ -2.16
CDR2Q01850 SNORA4.2-201ENST00000365313 147 ntBASIC1.58□□□□□ -2.16
CDR2Q01850 Y_RNA.368-201ENST00000365547 113 ntBASIC1.58□□□□□ -2.16
CDR2Q01850 Y_RNA.461-201ENST00000384263 103 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms