Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNA5SP285-201ENST00000516619 119 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 RNU7-156P-201ENST00000517214 74 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 RNU2-60P-201ENST00000517290 128 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.84□□□□□ -2.54
RPS28P62857 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.84□□□□□ -2.54
RPS28P62857 MIR4752-201ENST00000579672 72 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 MIR3681-201ENST00000580089 72 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 SNORD92-201ENST00000585078 85 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 AL442067.1-201ENST00000613261 223 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.85□□□□□ -2.55
RPS28P62857 SNORD114-14-201ENST00000362723 75 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 MIR224-201ENST00000384889 81 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 MIR521-1-201ENST00000384902 87 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 MIR802-201ENST00000390235 94 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 MTCYBP4-201ENST00000401524 249 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 RNU2-72P-201ENST00000411175 163 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 AL008987.1-201ENST00000415528 237 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.85□□□□□ -2.55
RPS28P62857 AL365184.2-201ENST00000431139 435 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 MTCO1P5-201ENST00000433573 344 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 AC107297.1-201ENST00000459991 176 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.85□□□□□ -2.55
RPS28P62857 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.85□□□□□ -2.55
RPS28P62857 RNU6-504P-201ENST00000516568 104 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 AC104576.1-201ENST00000524225 88 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.85□□□□□ -2.55
RPS28P62857 MIR4263-201ENST00000584745 83 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 FAM157A-202ENST00000615155 405 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 uc_338.4-201ENST00000616635 176 ntBASIC-0.85□□□□□ -2.55
RPS28P62857 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 RNU6-280P-201ENST00000364145 104 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 RNU6-125P-201ENST00000384505 107 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 RNU6-636P-201ENST00000384598 107 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 SNORA26.5-201ENST00000391215 123 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 SNORA3B-201ENST00000391305 131 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 MIR548L-201ENST00000408303 86 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 AC244250.2-201ENST00000418731 148 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 MTCO1P20-201ENST00000425366 358 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.86□□□□□ -2.55
RPS28P62857 MIR6759-201ENST00000638110 65 ntBASIC-0.86□□□□□ -2.55
RPS28P62857 AC010332.2-201ENST00000613083 1904 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 SNORA63C-201ENST00000364578 129 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 RNU6-784P-201ENST00000384330 106 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 MIR1-2-201ENST00000384961 85 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 AC073464.1-201ENST00000429823 534 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 AL358934.1-201ENST00000432346 324 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 AC022878.1-201ENST00000530684 149 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 SCOCP1-201ENST00000554676 349 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 NAMPTP3-201ENST00000569273 224 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 MIR4493-201ENST00000584016 73 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 AC064836.2-201ENST00000609491 462 ntBASIC-0.87□□□□□ -2.55
RPS28P62857 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.87□□□□□ -2.55
RPS28P62857 RNU6-117P-201ENST00000365415 107 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.88□□□□□ -2.55
RPS28P62857 POLR2KP2-201ENST00000438155 177 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.88□□□□□ -2.55
RPS28P62857 AC010424.1-201ENST00000506336 297 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.88□□□□□ -2.55
RPS28P62857 CR383656.4-201ENST00000546909 122 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 MIR3925-201ENST00000584674 77 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 AC027807.2-201ENST00000616099 408 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 MIR6828-201ENST00000636181 60 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 AC091304.10-201ENST00000641554 121 ntBASIC-0.88□□□□□ -2.55
RPS28P62857 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 RNU6-541P-201ENST00000384709 110 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 MIR329-1-201ENST00000385028 80 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 MIR1287-201ENST00000408492 90 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 RNU4-63P-201ENST00000411313 118 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 FCF1P9-201ENST00000412546 282 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 RPL21P38-201ENST00000418090 167 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.89□□□□□ -2.55
RPS28P62857 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.89□□□□□ -2.55
RPS28P62857 AC090617.3-201ENST00000573670 475 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 MIR548AD-201ENST00000584780 82 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 AP000811.1-201ENST00000603803 651 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 Z84480.1-201ENST00000605131 311 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.89□□□□□ -2.55
RPS28P62857 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.9□□□□□ -2.55
RPS28P62857 MIR148A-201ENST00000362215 68 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 RNA5SP205-201ENST00000364653 136 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 RNU6-108P-201ENST00000365558 107 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 RNY1P7-201ENST00000384743 110 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 MIR153-2-201ENST00000385225 87 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 MIR613-201ENST00000385248 95 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 MT-TQ-201ENST00000387372 72 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 MIR18B-201ENST00000454574 71 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 RNU7-185P-201ENST00000459215 60 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 AC093303.1-201ENST00000514549 295 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms