Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.05□□□□□ -2.58
CKS1BP61024 RNU6-276P-201ENST00000516114 96 ntBASIC-1.05□□□□□ -2.58
CKS1BP61024 SNORD27.1-201ENST00000516319 72 ntBASIC-1.05□□□□□ -2.58
CKS1BP61024 RNU6-135P-201ENST00000516769 101 ntBASIC-1.05□□□□□ -2.58
CKS1BP61024 AC018448.1-201ENST00000552843 316 ntBASIC-1.05□□□□□ -2.58
CKS1BP61024 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.05□□□□□ -2.58
CKS1BP61024 AC127459.3-201ENST00000624328 466 ntBASIC-1.05□□□□□ -2.58
CKS1BP61024 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.06□□□□□ -2.58
CKS1BP61024 MTCYBP4-201ENST00000401524 249 ntBASIC-1.06□□□□□ -2.58
CKS1BP61024 RNU4-63P-201ENST00000411313 118 ntBASIC-1.06□□□□□ -2.58
CKS1BP61024 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.06□□□□□ -2.58
CKS1BP61024 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.06□□□□□ -2.58
CKS1BP61024 SCARNA18-201ENST00000459004 134 ntBASIC-1.06□□□□□ -2.58
CKS1BP61024 RNU7-185P-201ENST00000459215 60 ntBASIC-1.06□□□□□ -2.58
CKS1BP61024 AC005771.1-201ENST00000585581 349 ntBASIC-1.06□□□□□ -2.58
CKS1BP61024 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 RNA5SP368-201ENST00000364298 116 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.07□□□□□ -2.58
CKS1BP61024 Z95118.1-201ENST00000421372 247 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.07□□□□□ -2.58
CKS1BP61024 AL365184.2-201ENST00000431139 435 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 AC074198.2-201ENST00000508153 258 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 AC105417.1-201ENST00000514691 285 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 RNU6-897P-201ENST00000517135 105 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 AC091144.1-201ENST00000519573 138 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 CR383656.4-201ENST00000546909 122 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 MIR4703-201ENST00000577728 79 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 AC009878.1-201ENST00000621819 340 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 AC106754.1-201ENST00000562632 1513 ntBASIC-1.07□□□□□ -2.58
CKS1BP61024 MIR148A-201ENST00000362215 68 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 RNU6-784P-201ENST00000384330 106 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 MIR501-201ENST00000390204 84 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 AL022718.1-201ENST00000412004 84 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.08□□□□□ -2.58
CKS1BP61024 AL358934.1-201ENST00000432346 324 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 USP9YP25-201ENST00000457708 443 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.08□□□□□ -2.58
CKS1BP61024 RNA5SP47-201ENST00000517230 109 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.08□□□□□ -2.58
CKS1BP61024 MIR548AD-201ENST00000584780 82 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 RNU1-29P-201ENST00000606574 126 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 AC016597.2-201ENST00000613256 341 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 AL442067.1-201ENST00000613261 223 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 MIR6514-201ENST00000622549 70 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.08□□□□□ -2.58
CKS1BP61024 MTND1P7-201ENST00000632801 297 ntBASIC-1.08□□□□□ -2.58
CKS1BP61024 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.09□□□□□ -2.58
CKS1BP61024 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.09□□□□□ -2.58
CKS1BP61024 RNU6-480P-201ENST00000384332 107 ntBASIC-1.09□□□□□ -2.58
CKS1BP61024 MIR570-201ENST00000384917 97 ntBASIC-1.09□□□□□ -2.58
CKS1BP61024 RNU4-30P-201ENST00000410245 143 ntBASIC-1.09□□□□□ -2.58
CKS1BP61024 AC133104.1-201ENST00000429100 218 ntBASIC-1.09□□□□□ -2.58
CKS1BP61024 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.09□□□□□ -2.58
CKS1BP61024 AC046134.1-201ENST00000514454 666 ntBASIC-1.09□□□□□ -2.58
CKS1BP61024 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.09□□□□□ -2.58
CKS1BP61024 AC010332.2-201ENST00000613083 1904 ntBASIC-1.1□□□□□ -2.59
CKS1BP61024 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.1□□□□□ -2.59
CKS1BP61024 MIR522-201ENST00000385071 87 ntBASIC-1.1□□□□□ -2.59
CKS1BP61024 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.1□□□□□ -2.59
CKS1BP61024 AC090617.3-201ENST00000573670 475 ntBASIC-1.1□□□□□ -2.59
CKS1BP61024 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.1□□□□□ -2.59
CKS1BP61024 MIR4432-201ENST00000581823 84 ntBASIC-1.1□□□□□ -2.59
CKS1BP61024 FAM157A-202ENST00000615155 405 ntBASIC-1.1□□□□□ -2.59
CKS1BP61024 RNU6-280P-201ENST00000364145 104 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 RNU6-74P-201ENST00000384235 107 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.11□□□□□ -2.59
CKS1BP61024 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.11□□□□□ -2.59
CKS1BP61024 AC093303.1-201ENST00000514549 295 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 SNORA19.3-201ENST00000516165 130 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 SCOCP1-201ENST00000554676 349 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 MIR4752-201ENST00000579672 72 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 U2.17-201ENST00000611454 95 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 uc_338.28-201ENST00000612082 187 ntBASIC-1.11□□□□□ -2.59
CKS1BP61024 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.11□□□□□ -2.59
CKS1BP61024 RNU6-660P-201ENST00000364566 109 ntBASIC-1.12□□□□□ -2.59
CKS1BP61024 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.12□□□□□ -2.59
CKS1BP61024 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.12□□□□□ -2.59
CKS1BP61024 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.12□□□□□ -2.59
CKS1BP61024 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.12□□□□□ -2.59
CKS1BP61024 AC087685.1-201ENST00000587507 141 ntBASIC-1.12□□□□□ -2.59
CKS1BP61024 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.12□□□□□ -2.59
CKS1BP61024 AC022306.2-201ENST00000617563 647 ntBASIC-1.12□□□□□ -2.59
CKS1BP61024 AC099654.13-201ENST00000639774 207 ntBASIC-1.12□□□□□ -2.59
CKS1BP61024 SNORD115-32-201ENST00000364079 82 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 SNORD95.1-201ENST00000364099 68 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 SNORA75.1-201ENST00000391130 148 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 GPR143P-201ENST00000434155 205 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 AC109327.2-201ENST00000448339 378 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 AC091959.1-201ENST00000495857 238 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.13□□□□□ -2.59
CKS1BP61024 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.13□□□□□ -2.59
CKS1BP61024 AC010486.3-201ENST00000511602 785 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 AC121247.2-201ENST00000604776 136 ntBASIC-1.13□□□□□ -2.59
CKS1BP61024 RNU4-92P-201ENST00000363783 136 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms