Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU7-4P-201ENST00000516961 62 ntBASIC1.04□□□□□ -2.24
SRP54P61011 MTND4LP26-201ENST00000518144 282 ntBASIC1.04□□□□□ -2.24
SRP54P61011 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
SRP54P61011 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
SRP54P61011 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SRP54P61011 AL391516.1-201ENST00000554380 2449 ntBASIC1.04□□□□□ -2.24
SRP54P61011 SNORD115-30-201ENST00000364117 82 ntBASIC1.03□□□□□ -2.24
SRP54P61011 MIR518E-201ENST00000385252 88 ntBASIC1.03□□□□□ -2.24
SRP54P61011 RNU4-14P-201ENST00000410858 122 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.03□□□□□ -2.24
SRP54P61011 PDCL2P1-201ENST00000419302 352 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AC093850.1-201ENST00000454121 251 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AC233266.1-201ENST00000454518 96 ntBASIC1.03□□□□□ -2.24
SRP54P61011 ELOCP24-201ENST00000456370 334 ntBASIC1.03□□□□□ -2.24
SRP54P61011 RNU6-408P-201ENST00000515910 100 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.03□□□□□ -2.24
SRP54P61011 MIR5690-201ENST00000583739 73 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AL117336.2-201ENST00000602435 335 ntBASIC1.03□□□□□ -2.24
SRP54P61011 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AC242852.1-201ENST00000612151 96 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AC092794.1-201ENST00000612734 582 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AC087588.2-201ENST00000617667 426 ntBASIC1.03□□□□□ -2.24
SRP54P61011 AC244015.1-201ENST00000622301 99 ntBASIC1.03□□□□□ -2.24
SRP54P61011 TPTEP1-208ENST00000636884 213 ntBASIC1.03□□□□□ -2.24
SRP54P61011 RNU6-833P-201ENST00000363486 107 ntBASIC1.02□□□□□ -2.25
SRP54P61011 RNU6-1188P-201ENST00000363795 107 ntBASIC1.02□□□□□ -2.25
SRP54P61011 RNU4-41P-201ENST00000364426 143 ntBASIC1.02□□□□□ -2.25
SRP54P61011 Y_RNA.269-201ENST00000364685 89 ntBASIC1.02□□□□□ -2.25
SRP54P61011 MIR891A-201ENST00000401237 79 ntBASIC1.02□□□□□ -2.25
SRP54P61011 RNU6-1156P-201ENST00000410365 100 ntBASIC1.02□□□□□ -2.25
SRP54P61011 RNU6-370P-201ENST00000411008 104 ntBASIC1.02□□□□□ -2.25
SRP54P61011 Z98949.2-201ENST00000440996 144 ntBASIC1.02□□□□□ -2.25
SRP54P61011 MTND4P17-201ENST00000470444 350 ntBASIC1.02□□□□□ -2.25
SRP54P61011 CYCTP-201ENST00000504253 315 ntBASIC1.02□□□□□ -2.25
SRP54P61011 AC023442.1-201ENST00000531247 422 ntBASIC1.02□□□□□ -2.25
SRP54P61011 AC022306.2-201ENST00000617563 647 ntBASIC1.02□□□□□ -2.25
SRP54P61011 AC027279.3-201ENST00000625055 122 ntBASIC1.02□□□□□ -2.25
SRP54P61011 MIR6767-201ENST00000637302 66 ntBASIC1.02□□□□□ -2.25
SRP54P61011 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SRP54P61011 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
SRP54P61011 Y_RNA.248-201ENST00000364501 109 ntBASIC1.01□□□□□ -2.25
SRP54P61011 RNU6-310P-201ENST00000384655 107 ntBASIC1.01□□□□□ -2.25
SRP54P61011 MIR520E-201ENST00000384867 87 ntBASIC1.01□□□□□ -2.25
SRP54P61011 MT-TL1-201ENST00000386347 75 ntBASIC1.01□□□□□ -2.25
SRP54P61011 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.01□□□□□ -2.25
SRP54P61011 Y_RNA.646-201ENST00000410980 101 ntBASIC1.01□□□□□ -2.25
SRP54P61011 AC063976.4-201ENST00000421971 163 ntBASIC1.01□□□□□ -2.25
SRP54P61011 AL162725.1-201ENST00000435405 301 ntBASIC1.01□□□□□ -2.25
SRP54P61011 FCF1P4-201ENST00000448326 183 ntBASIC1.01□□□□□ -2.25
SRP54P61011 SNORD79.1-201ENST00000516069 84 ntBASIC1.01□□□□□ -2.25
SRP54P61011 RNU6-947P-201ENST00000516264 106 ntBASIC1.01□□□□□ -2.25
SRP54P61011 RNU6-113P-201ENST00000516653 101 ntBASIC1.01□□□□□ -2.25
SRP54P61011 RNU6-63P-201ENST00000516690 95 ntBASIC1.01□□□□□ -2.25
SRP54P61011 AC144568.1-201ENST00000520139 137 ntBASIC1.01□□□□□ -2.25
SRP54P61011 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.01□□□□□ -2.25
SRP54P61011 AC006380.1-201ENST00000603598 186 ntBASIC1.01□□□□□ -2.25
SRP54P61011 AC004467.1-201ENST00000615678 330 ntBASIC1.01□□□□□ -2.25
SRP54P61011 RNU6-961P-201ENST00000363893 105 ntBASIC1□□□□□ -2.25
SRP54P61011 Y_RNA.355-201ENST00000365462 98 ntBASIC1□□□□□ -2.25
SRP54P61011 RNY3P4-201ENST00000384428 101 ntBASIC1□□□□□ -2.25
SRP54P61011 RNU6-136P-201ENST00000384663 107 ntBASIC1□□□□□ -2.25
SRP54P61011 RNU6-876P-201ENST00000391295 104 ntBASIC1□□□□□ -2.25
SRP54P61011 AL354751.2-201ENST00000415471 210 ntBASIC1□□□□□ -2.25
SRP54P61011 AC104332.1-201ENST00000440471 797 ntBASIC1□□□□□ -2.25
SRP54P61011 LINC01399-202ENST00000458450 244 ntBASIC1□□□□□ -2.25
SRP54P61011 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1□□□□□ -2.25
SRP54P61011 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
SRP54P61011 AC120024.3-201ENST00000603167 156 ntBASIC1□□□□□ -2.25
SRP54P61011 Y_RNA.122-201ENST00000363331 96 ntBASIC0.99□□□□□ -2.25
SRP54P61011 SNORD81.2-201ENST00000365153 76 ntBASIC0.99□□□□□ -2.25
SRP54P61011 SNORA80D-201ENST00000384488 135 ntBASIC0.99□□□□□ -2.25
SRP54P61011 Y_RNA.508-201ENST00000384502 114 ntBASIC0.99□□□□□ -2.25
SRP54P61011 RNU6-1105P-201ENST00000384774 107 ntBASIC0.99□□□□□ -2.25
SRP54P61011 RNA5SP511-201ENST00000410487 115 ntBASIC0.99□□□□□ -2.25
SRP54P61011 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.99□□□□□ -2.25
SRP54P61011 MTND1P2-201ENST00000430604 821 ntBASIC0.99□□□□□ -2.25
SRP54P61011 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
SRP54P61011 RNU6-1337P-201ENST00000516525 95 ntBASIC0.99□□□□□ -2.25
SRP54P61011 FAM106DP-201ENST00000586416 501 ntBASIC0.99□□□□□ -2.25
SRP54P61011 AC004832.4-201ENST00000608952 331 ntBASIC0.99□□□□□ -2.25
SRP54P61011 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SRP54P61011 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
SRP54P61011 U8.5-201ENST00000364528 136 ntBASIC0.98□□□□□ -2.25
SRP54P61011 RNU6-890P-201ENST00000384121 107 ntBASIC0.98□□□□□ -2.25
SRP54P61011 Y_RNA.505-201ENST00000384489 102 ntBASIC0.98□□□□□ -2.25
SRP54P61011 SNORD78.2-201ENST00000391076 69 ntBASIC0.98□□□□□ -2.25
SRP54P61011 AL031003.1-201ENST00000404229 172 ntBASIC0.98□□□□□ -2.25
SRP54P61011 RNU2-54P-201ENST00000410299 190 ntBASIC0.98□□□□□ -2.25
SRP54P61011 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.98□□□□□ -2.25
SRP54P61011 RPS4XP11-201ENST00000446897 772 ntBASIC0.98□□□□□ -2.25
SRP54P61011 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
SRP54P61011 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.98□□□□□ -2.25
SRP54P61011 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.98□□□□□ -2.25
SRP54P61011 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.98□□□□□ -2.25
SRP54P61011 SNORA4-201ENST00000584302 138 ntBASIC0.98□□□□□ -2.25
SRP54P61011 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SRP54P61011 AL078603.1-201ENST00000603824 313 ntBASIC0.98□□□□□ -2.25
SRP54P61011 AC025253.1-201ENST00000613623 543 ntBASIC0.98□□□□□ -2.25
SRP54P61011 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SRP54P61011 AC133104.2-201ENST00000615272 193 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms