Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU1-96P-201ENST00000364163 162 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 Y_RNA.518-201ENST00000384552 113 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 MIR515-2-201ENST00000384883 83 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 MIR515-1-201ENST00000384884 83 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HDAC4P56524 RNA5SP467-201ENST00000391274 118 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.96□□□□□ -2.1
HDAC4P56524 AL135790.2-201ENST00000437701 267 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 MRPS10P1-201ENST00000448483 130 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 SUMO1P2-201ENST00000452524 304 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.96□□□□□ -2.1
HDAC4P56524 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 AC023157.2-201ENST00000540596 141 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.96□□□□□ -2.1
HDAC4P56524 MIR4503-201ENST00000582187 83 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 snoU13.31-201ENST00000607291 104 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HDAC4P56524 Y_RNA.355-201ENST00000365462 98 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 Y_RNA.383-201ENST00000383855 97 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 RNU6-21P-201ENST00000384710 107 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 MIR873-201ENST00000401120 77 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.95□□□□□ -2.1
HDAC4P56524 AC003989.2-201ENST00000440224 169 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 AC245517.4-201ENST00000448601 281 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.95□□□□□ -2.1
HDAC4P56524 AL137100.2-201ENST00000555786 315 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 MIR5094-201ENST00000578766 85 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 MIR4713-201ENST00000582691 75 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 AC006380.1-201ENST00000603598 186 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 U6.73-201ENST00000619194 103 ntBASIC1.95□□□□□ -2.1
HDAC4P56524 RNU4-90P-201ENST00000362773 141 ntBASIC1.94□□□□□ -2.1
HDAC4P56524 RNU6-117P-201ENST00000365415 107 ntBASIC1.94□□□□□ -2.1
HDAC4P56524 RPS26P55-201ENST00000471178 356 ntBASIC1.94□□□□□ -2.1
HDAC4P56524 AC110588.1-201ENST00000559699 137 ntBASIC1.94□□□□□ -2.1
HDAC4P56524 MIR3122-201ENST00000577243 73 ntBASIC1.94□□□□□ -2.1
HDAC4P56524 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HDAC4P56524 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.93□□□□□ -2.1
HDAC4P56524 AC010615.1-201ENST00000594254 1764 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 SNORD114-7-201ENST00000362520 77 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 RNU1-22P-201ENST00000363334 158 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 RNU6-271P-201ENST00000363858 105 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 RNU6-290P-201ENST00000365212 101 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 Y_RNA.461-201ENST00000384263 103 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 RNU6-505P-201ENST00000384427 107 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 MIR499A-201ENST00000384903 122 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 AC245047.4-201ENST00000433189 144 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 RPS29P11-201ENST00000496507 171 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 RNA5SP20-201ENST00000515976 84 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 RNU6-1338P-201ENST00000516328 91 ntBASIC1.93□□□□□ -2.1
HDAC4P56524 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.93□□□□□ -2.1
HDAC4P56524 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.93□□□□□ -2.1
HDAC4P56524 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.93□□□□□ -2.1
HDAC4P56524 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.93□□□□□ -2.1
HDAC4P56524 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
HDAC4P56524 RNU4-80P-201ENST00000363200 141 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 RNY1P10-201ENST00000363268 113 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 Y_RNA.136-201ENST00000363444 102 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 Y_RNA.144-201ENST00000363521 113 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 RNU6-324P-201ENST00000363957 106 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 RNU6-407P-201ENST00000365280 104 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 MIR518E-201ENST00000385252 88 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 RNA5SP323-201ENST00000391094 133 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 EBAG9P1-201ENST00000418955 543 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 MTCO1P5-201ENST00000433573 344 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 TRBVB-201ENST00000477100 408 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 RPS27P22-201ENST00000478056 241 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 RPL36AP21-201ENST00000490372 323 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 Y_RNA.668-201ENST00000516233 93 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.92□□□□□ -2.1
HDAC4P56524 SUB1P4-201ENST00000566062 339 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
HDAC4P56524 MIR4438-201ENST00000585271 93 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.92□□□□□ -2.1
HDAC4P56524 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.92□□□□□ -2.1
HDAC4P56524 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
HDAC4P56524 Y_RNA.193-201ENST00000363979 102 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 Y_RNA.237-201ENST00000364439 102 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 RNU6-463P-201ENST00000384340 107 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 SNORD116-13-201ENST00000384408 92 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 Y_RNA.569-201ENST00000384749 103 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 RNU6-713P-201ENST00000384761 107 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 AC009310.1-201ENST00000414414 451 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.91□□□□□ -2.1
HDAC4P56524 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
HDAC4P56524 POLR2KP2-201ENST00000438155 177 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.91□□□□□ -2.1
HDAC4P56524 AC107393.1-201ENST00000512403 346 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 AC097462.1-201ENST00000514125 324 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 RNU6-1337P-201ENST00000516525 95 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 RNU6-63P-201ENST00000516690 95 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 AC024995.1-201ENST00000523014 93 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 DEFB108E-201ENST00000524692 240 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 AL359075.3-201ENST00000613288 217 ntBASIC1.91□□□□□ -2.1
HDAC4P56524 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms