Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNA5SP475-201ENST00000410568 110 ntBASIC0.62□□□□□ -2.31
CDH6P55285 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
CDH6P55285 Y_RNA.621-201ENST00000411065 96 ntBASIC0.62□□□□□ -2.31
CDH6P55285 MTCYBP10-201ENST00000424905 650 ntBASIC0.62□□□□□ -2.31
CDH6P55285 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.62□□□□□ -2.31
CDH6P55285 UBE2V1P7-201ENST00000446395 340 ntBASIC0.62□□□□□ -2.31
CDH6P55285 AC026782.1-201ENST00000512952 449 ntBASIC0.62□□□□□ -2.31
CDH6P55285 SNORA40.9-201ENST00000515895 93 ntBASIC0.62□□□□□ -2.31
CDH6P55285 RNU6-1016P-201ENST00000516689 94 ntBASIC0.62□□□□□ -2.31
CDH6P55285 AC105029.1-201ENST00000520250 669 ntBASIC0.62□□□□□ -2.31
CDH6P55285 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.62□□□□□ -2.31
CDH6P55285 AC005828.6-201ENST00000606610 232 ntBASIC0.62□□□□□ -2.31
CDH6P55285 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.62□□□□□ -2.31
CDH6P55285 MIR410-201ENST00000362222 80 ntBASIC0.61□□□□□ -2.31
CDH6P55285 Y_RNA.224-201ENST00000364308 111 ntBASIC0.61□□□□□ -2.31
CDH6P55285 RNU6-318P-201ENST00000384283 103 ntBASIC0.61□□□□□ -2.31
CDH6P55285 Y_RNA.594-201ENST00000410373 140 ntBASIC0.61□□□□□ -2.31
CDH6P55285 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.61□□□□□ -2.31
CDH6P55285 AC092423.1-201ENST00000430165 186 ntBASIC0.61□□□□□ -2.31
CDH6P55285 Z83846.1-201ENST00000446798 265 ntBASIC0.61□□□□□ -2.31
CDH6P55285 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
CDH6P55285 AC114811.1-201ENST00000507207 168 ntBASIC0.61□□□□□ -2.31
CDH6P55285 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.61□□□□□ -2.31
CDH6P55285 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
CDH6P55285 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.61□□□□□ -2.31
CDH6P55285 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
CDH6P55285 Y_RNA.436-201ENST00000384097 102 ntBASIC0.6□□□□□ -2.31
CDH6P55285 Y_RNA.573-201ENST00000384763 105 ntBASIC0.6□□□□□ -2.31
CDH6P55285 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
CDH6P55285 AC074085.1-201ENST00000413598 418 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AL354751.2-201ENST00000415471 210 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AC016907.1-201ENST00000419483 435 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AC093019.1-201ENST00000443135 252 ntBASIC0.6□□□□□ -2.31
CDH6P55285 RPS20P10-201ENST00000451209 253 ntBASIC0.6□□□□□ -2.31
CDH6P55285 ELOCP24-201ENST00000456370 334 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.6□□□□□ -2.31
CDH6P55285 Y_RNA.670-201ENST00000516255 105 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AC023827.1-201ENST00000569247 97 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AC027279.3-201ENST00000625055 122 ntBASIC0.6□□□□□ -2.31
CDH6P55285 AC027514.1-201ENST00000588561 1603 ntBASIC0.6□□□□□ -2.31
CDH6P55285 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CDH6P55285 MIR103A2-201ENST00000362154 78 ntBASIC0.59□□□□□ -2.31
CDH6P55285 RNA5SP264-201ENST00000363115 107 ntBASIC0.59□□□□□ -2.31
CDH6P55285 SNORA25.3-201ENST00000363205 127 ntBASIC0.59□□□□□ -2.31
CDH6P55285 RNU6-1335P-201ENST00000365426 107 ntBASIC0.59□□□□□ -2.31
CDH6P55285 MIR452-201ENST00000385020 85 ntBASIC0.59□□□□□ -2.31
CDH6P55285 MIR516B2-201ENST00000385190 85 ntBASIC0.59□□□□□ -2.31
CDH6P55285 MIR548F5-201ENST00000408421 86 ntBASIC0.59□□□□□ -2.31
CDH6P55285 RNU6-1050P-201ENST00000410388 107 ntBASIC0.59□□□□□ -2.31
CDH6P55285 RNA5SP511-201ENST00000410487 115 ntBASIC0.59□□□□□ -2.31
CDH6P55285 RPS3AP52-201ENST00000435639 297 ntBASIC0.59□□□□□ -2.31
CDH6P55285 SUMO1P2-201ENST00000452524 304 ntBASIC0.59□□□□□ -2.31
CDH6P55285 AC113410.1-201ENST00000505029 247 ntBASIC0.59□□□□□ -2.31
CDH6P55285 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.59□□□□□ -2.31
CDH6P55285 Y_RNA.226-201ENST00000364337 114 ntBASIC0.58□□□□□ -2.32
CDH6P55285 Y_RNA.238-201ENST00000364441 102 ntBASIC0.58□□□□□ -2.32
CDH6P55285 Y_RNA.243-201ENST00000364481 109 ntBASIC0.58□□□□□ -2.32
CDH6P55285 Y_RNA.453-201ENST00000384223 109 ntBASIC0.58□□□□□ -2.32
CDH6P55285 SNORD12B-201ENST00000410433 91 ntBASIC0.58□□□□□ -2.32
CDH6P55285 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.58□□□□□ -2.32
CDH6P55285 RPL7P42-201ENST00000481005 679 ntBASIC0.58□□□□□ -2.32
CDH6P55285 RPS29P25-201ENST00000481709 171 ntBASIC0.58□□□□□ -2.32
CDH6P55285 AC093534.1-201ENST00000504977 132 ntBASIC0.58□□□□□ -2.32
CDH6P55285 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
CDH6P55285 AL591926.4-201ENST00000616895 298 ntBASIC0.58□□□□□ -2.32
CDH6P55285 RNU6-1297P-201ENST00000384415 104 ntBASIC0.57□□□□□ -2.32
CDH6P55285 SNORD115-47-201ENST00000391226 86 ntBASIC0.57□□□□□ -2.32
CDH6P55285 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
CDH6P55285 MIR1298-201ENST00000408783 112 ntBASIC0.57□□□□□ -2.32
CDH6P55285 RNU6-329P-201ENST00000459618 107 ntBASIC0.57□□□□□ -2.32
CDH6P55285 RNU6-1337P-201ENST00000516525 95 ntBASIC0.57□□□□□ -2.32
CDH6P55285 Y_RNA.708-201ENST00000516950 96 ntBASIC0.57□□□□□ -2.32
CDH6P55285 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
CDH6P55285 AC009229.3-201ENST00000608056 282 ntBASIC0.57□□□□□ -2.32
CDH6P55285 MIR1244-1-201ENST00000612829 85 ntBASIC0.57□□□□□ -2.32
CDH6P55285 AC007014.2-201ENST00000615581 479 ntBASIC0.57□□□□□ -2.32
CDH6P55285 MIR1244-3-201ENST00000635744 85 ntBASIC0.57□□□□□ -2.32
CDH6P55285 MIR1244-2-201ENST00000636449 85 ntBASIC0.57□□□□□ -2.32
CDH6P55285 MIR1244-4-202ENST00000636813 85 ntBASIC0.57□□□□□ -2.32
CDH6P55285 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CDH6P55285 RNU6-601P-201ENST00000384540 107 ntBASIC0.56□□□□□ -2.32
CDH6P55285 RNU6-1105P-201ENST00000384774 107 ntBASIC0.56□□□□□ -2.32
CDH6P55285 MIR1287-201ENST00000408492 90 ntBASIC0.56□□□□□ -2.32
CDH6P55285 U7.7-201ENST00000459276 60 ntBASIC0.56□□□□□ -2.32
CDH6P55285 AC092989.1-201ENST00000481235 277 ntBASIC0.56□□□□□ -2.32
CDH6P55285 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
CDH6P55285 RNU6-1223P-201ENST00000517124 104 ntBASIC0.56□□□□□ -2.32
CDH6P55285 AC131055.1-201ENST00000584626 316 ntBASIC0.56□□□□□ -2.32
CDH6P55285 SEPT14P17-201ENST00000617978 177 ntBASIC0.56□□□□□ -2.32
CDH6P55285 MIR3688-2-201ENST00000636963 87 ntBASIC0.56□□□□□ -2.32
CDH6P55285 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CDH6P55285 Y_RNA.3-201ENST00000362331 103 ntBASIC0.55□□□□□ -2.32
CDH6P55285 RNU6-1301P-201ENST00000362724 104 ntBASIC0.55□□□□□ -2.32
CDH6P55285 SNORD115-30-201ENST00000364117 82 ntBASIC0.55□□□□□ -2.32
CDH6P55285 RNU6-593P-201ENST00000364716 112 ntBASIC0.55□□□□□ -2.32
CDH6P55285 MIR520C-201ENST00000385005 87 ntBASIC0.55□□□□□ -2.32
CDH6P55285 MIR548K-201ENST00000408406 116 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms