Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.89□□□□□ -2.27
MSH6P52701 BX284668.6-201ENST00000606899 438 ntBASIC0.89□□□□□ -2.27
MSH6P52701 AC007014.2-201ENST00000615581 479 ntBASIC0.89□□□□□ -2.27
MSH6P52701 AC104260.1-201ENST00000616660 539 ntBASIC0.89□□□□□ -2.27
MSH6P52701 MIR6086-201ENST00000638065 55 ntBASIC0.89□□□□□ -2.27
MSH6P52701 AC073544.1-201ENST00000600110 1595 ntBASIC0.89□□□□□ -2.27
MSH6P52701 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
MSH6P52701 Y_RNA.6-201ENST00000362350 114 ntBASIC0.88□□□□□ -2.27
MSH6P52701 Y_RNA.86-201ENST00000363020 111 ntBASIC0.88□□□□□ -2.27
MSH6P52701 Y_RNA.265-201ENST00000364677 108 ntBASIC0.88□□□□□ -2.27
MSH6P52701 Y_RNA.498-201ENST00000384460 102 ntBASIC0.88□□□□□ -2.27
MSH6P52701 U8.16-201ENST00000391279 133 ntBASIC0.88□□□□□ -2.27
MSH6P52701 RNA5SP511-201ENST00000410487 115 ntBASIC0.88□□□□□ -2.27
MSH6P52701 MTND3P8-201ENST00000412909 339 ntBASIC0.88□□□□□ -2.27
MSH6P52701 CALM2P4-201ENST00000430810 426 ntBASIC0.88□□□□□ -2.27
MSH6P52701 U8.22-201ENST00000459141 133 ntBASIC0.88□□□□□ -2.27
MSH6P52701 AC091021.1-201ENST00000468051 388 ntBASIC0.88□□□□□ -2.27
MSH6P52701 AC018710.1-201ENST00000506509 158 ntBASIC0.88□□□□□ -2.27
MSH6P52701 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
MSH6P52701 RNU6-718P-201ENST00000516166 105 ntBASIC0.88□□□□□ -2.27
MSH6P52701 RNU6-922P-201ENST00000516753 99 ntBASIC0.88□□□□□ -2.27
MSH6P52701 SNORA70.22-201ENST00000517160 124 ntBASIC0.88□□□□□ -2.27
MSH6P52701 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.88□□□□□ -2.27
MSH6P52701 AC018448.1-201ENST00000552843 316 ntBASIC0.88□□□□□ -2.27
MSH6P52701 MIR4778-201ENST00000577635 80 ntBASIC0.88□□□□□ -2.27
MSH6P52701 AC005828.6-201ENST00000606610 232 ntBASIC0.88□□□□□ -2.27
MSH6P52701 U6.115-201ENST00000636045 103 ntBASIC0.88□□□□□ -2.27
MSH6P52701 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.88□□□□□ -2.27
MSH6P52701 RNU6-454P-201ENST00000364292 107 ntBASIC0.87□□□□□ -2.27
MSH6P52701 MIR548F5-201ENST00000408421 86 ntBASIC0.87□□□□□ -2.27
MSH6P52701 MTND1P34-201ENST00000438556 671 ntBASIC0.87□□□□□ -2.27
MSH6P52701 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.87□□□□□ -2.27
MSH6P52701 RNU7-87P-201ENST00000459343 62 ntBASIC0.87□□□□□ -2.27
MSH6P52701 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.87□□□□□ -2.27
MSH6P52701 SNORA1B-201ENST00000362535 133 ntBASIC0.86□□□□□ -2.27
MSH6P52701 RNA5SP361-201ENST00000362686 118 ntBASIC0.86□□□□□ -2.27
MSH6P52701 RNU6-879P-201ENST00000364328 108 ntBASIC0.86□□□□□ -2.27
MSH6P52701 SNORA2.2-201ENST00000365473 135 ntBASIC0.86□□□□□ -2.27
MSH6P52701 Y_RNA.482-201ENST00000384377 111 ntBASIC0.86□□□□□ -2.27
MSH6P52701 SNORD41-201ENST00000386967 70 ntBASIC0.86□□□□□ -2.27
MSH6P52701 RNU5A-5P-201ENST00000411054 116 ntBASIC0.86□□□□□ -2.27
MSH6P52701 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.86□□□□□ -2.27
MSH6P52701 AC018865.2-201ENST00000423631 129 ntBASIC0.86□□□□□ -2.27
MSH6P52701 RPS3AP52-201ENST00000435639 297 ntBASIC0.86□□□□□ -2.27
MSH6P52701 AL137792.2-201ENST00000443484 235 ntBASIC0.86□□□□□ -2.27
MSH6P52701 AC048334.1-201ENST00000477975 159 ntBASIC0.86□□□□□ -2.27
MSH6P52701 AC105758.1-201ENST00000506038 399 ntBASIC0.86□□□□□ -2.27
MSH6P52701 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
MSH6P52701 Y_RNA.708-201ENST00000516950 96 ntBASIC0.86□□□□□ -2.27
MSH6P52701 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.86□□□□□ -2.27
MSH6P52701 AP002001.1-203ENST00000534002 267 ntBASIC0.86□□□□□ -2.27
MSH6P52701 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.86□□□□□ -2.27
MSH6P52701 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
MSH6P52701 AC005592.1-201ENST00000566527 1640 ntBASIC0.86□□□□□ -2.27
MSH6P52701 MIRLET7C-201ENST00000362160 84 ntBASIC0.85□□□□□ -2.27
MSH6P52701 Y_RNA.267-201ENST00000364679 109 ntBASIC0.85□□□□□ -2.27
MSH6P52701 Y_RNA.280-201ENST00000364765 112 ntBASIC0.85□□□□□ -2.27
MSH6P52701 Y_RNA.294-201ENST00000364916 102 ntBASIC0.85□□□□□ -2.27
MSH6P52701 RNU6-407P-201ENST00000365280 104 ntBASIC0.85□□□□□ -2.27
MSH6P52701 RNU6-117P-201ENST00000365415 107 ntBASIC0.85□□□□□ -2.27
MSH6P52701 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
MSH6P52701 RNU6-318P-201ENST00000384283 103 ntBASIC0.85□□□□□ -2.27
MSH6P52701 MIR19B1-201ENST00000384829 87 ntBASIC0.85□□□□□ -2.27
MSH6P52701 RNA5SP482-201ENST00000391269 118 ntBASIC0.85□□□□□ -2.27
MSH6P52701 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.85□□□□□ -2.27
MSH6P52701 RNA5SP475-201ENST00000410568 110 ntBASIC0.85□□□□□ -2.27
MSH6P52701 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.85□□□□□ -2.27
MSH6P52701 RPS20P10-201ENST00000451209 253 ntBASIC0.85□□□□□ -2.27
MSH6P52701 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
MSH6P52701 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.85□□□□□ -2.27
MSH6P52701 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
MSH6P52701 RNU6-229P-201ENST00000516614 102 ntBASIC0.85□□□□□ -2.27
MSH6P52701 RNU2-56P-201ENST00000516826 190 ntBASIC0.85□□□□□ -2.27
MSH6P52701 AP002004.2-201ENST00000531656 154 ntBASIC0.85□□□□□ -2.27
MSH6P52701 AC073869.6-201ENST00000640656 341 ntBASIC0.85□□□□□ -2.27
MSH6P52701 SNORD114-7-201ENST00000362520 77 ntBASIC0.84□□□□□ -2.27
MSH6P52701 Y_RNA.243-201ENST00000364481 109 ntBASIC0.84□□□□□ -2.27
MSH6P52701 Y_RNA.358-201ENST00000365491 99 ntBASIC0.84□□□□□ -2.27
MSH6P52701 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.84□□□□□ -2.27
MSH6P52701 Y_RNA.404-201ENST00000383978 102 ntBASIC0.84□□□□□ -2.27
MSH6P52701 RNU6-910P-201ENST00000390844 107 ntBASIC0.84□□□□□ -2.27
MSH6P52701 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
MSH6P52701 Z98949.2-201ENST00000440996 144 ntBASIC0.84□□□□□ -2.27
MSH6P52701 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.84□□□□□ -2.27
MSH6P52701 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.84□□□□□ -2.27
MSH6P52701 RPL7P42-201ENST00000481005 679 ntBASIC0.84□□□□□ -2.27
MSH6P52701 AC069439.1-201ENST00000494739 167 ntBASIC0.84□□□□□ -2.27
MSH6P52701 AC116353.2-201ENST00000505332 712 ntBASIC0.84□□□□□ -2.27
MSH6P52701 AC022493.2-201ENST00000506122 481 ntBASIC0.84□□□□□ -2.27
MSH6P52701 Y_RNA.655-201ENST00000515919 96 ntBASIC0.84□□□□□ -2.27
MSH6P52701 RNU7-12P-201ENST00000516030 62 ntBASIC0.84□□□□□ -2.27
MSH6P52701 SNORA31.4-201ENST00000516049 129 ntBASIC0.84□□□□□ -2.27
MSH6P52701 AL358944.1-201ENST00000528537 144 ntBASIC0.84□□□□□ -2.27
MSH6P52701 AC005899.2-201ENST00000584353 90 ntBASIC0.84□□□□□ -2.27
MSH6P52701 AC127459.3-201ENST00000624328 466 ntBASIC0.84□□□□□ -2.27
MSH6P52701 MIR5087-201ENST00000635826 76 ntBASIC0.84□□□□□ -2.27
MSH6P52701 MIR3674-201ENST00000636576 68 ntBASIC0.84□□□□□ -2.27
MSH6P52701 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.28
MSH6P52701 RNU4-79P-201ENST00000362764 141 ntBASIC0.83□□□□□ -2.28
MSH6P52701 RNU6-601P-201ENST00000384540 107 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms