Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.79□□□□□ -2.12
CLK1P49759 AL139156.1-201ENST00000412785 841 ntBASIC1.79□□□□□ -2.12
CLK1P49759 AL135790.2-201ENST00000437701 267 ntBASIC1.79□□□□□ -2.12
CLK1P49759 MTCO1P44-201ENST00000441935 243 ntBASIC1.79□□□□□ -2.12
CLK1P49759 SNORA31.17-201ENST00000516953 127 ntBASIC1.79□□□□□ -2.12
CLK1P49759 SUB1P4-201ENST00000566062 339 ntBASIC1.79□□□□□ -2.12
CLK1P49759 AC011921.3-201ENST00000605540 361 ntBASIC1.79□□□□□ -2.12
CLK1P49759 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CLK1P49759 SNORA25.1-201ENST00000362326 128 ntBASIC1.78□□□□□ -2.12
CLK1P49759 Y_RNA.217-201ENST00000364214 105 ntBASIC1.78□□□□□ -2.12
CLK1P49759 Y_RNA.329-201ENST00000365209 107 ntBASIC1.78□□□□□ -2.12
CLK1P49759 RNU6-975P-201ENST00000384296 105 ntBASIC1.78□□□□□ -2.12
CLK1P49759 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
CLK1P49759 AL031003.1-201ENST00000404229 172 ntBASIC1.78□□□□□ -2.12
CLK1P49759 MIR1267-201ENST00000408723 78 ntBASIC1.78□□□□□ -2.12
CLK1P49759 AC123900.1-201ENST00000420390 96 ntBASIC1.78□□□□□ -2.12
CLK1P49759 FTH1P12-201ENST00000432137 551 ntBASIC1.78□□□□□ -2.12
CLK1P49759 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.78□□□□□ -2.12
CLK1P49759 AC016717.1-201ENST00000448918 286 ntBASIC1.78□□□□□ -2.12
CLK1P49759 RNU1-98P-201ENST00000458992 160 ntBASIC1.78□□□□□ -2.12
CLK1P49759 Y_RNA.641-201ENST00000459414 105 ntBASIC1.78□□□□□ -2.12
CLK1P49759 RNU4-71P-201ENST00000516258 113 ntBASIC1.78□□□□□ -2.12
CLK1P49759 SNORA27.4-201ENST00000516650 95 ntBASIC1.78□□□□□ -2.12
CLK1P49759 SUMO2P18-201ENST00000518873 252 ntBASIC1.78□□□□□ -2.12
CLK1P49759 AC130289.1-201ENST00000577321 73 ntBASIC1.78□□□□□ -2.12
CLK1P49759 MIR5089-201ENST00000580047 84 ntBASIC1.78□□□□□ -2.12
CLK1P49759 MIR4282-201ENST00000583613 67 ntBASIC1.78□□□□□ -2.12
CLK1P49759 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
CLK1P49759 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.78□□□□□ -2.12
CLK1P49759 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.78□□□□□ -2.12
CLK1P49759 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLK1P49759 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.77□□□□□ -2.13
CLK1P49759 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.65-201ENST00000362846 100 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.82-201ENST00000363000 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.92-201ENST00000363043 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.117-201ENST00000363294 101 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.235-201ENST00000364412 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.274-201ENST00000364714 101 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.306-201ENST00000365015 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.312-201ENST00000365089 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.322-201ENST00000365151 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 AC016909.1-201ENST00000415916 166 ntBASIC1.77□□□□□ -2.13
CLK1P49759 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.77□□□□□ -2.13
CLK1P49759 SNORD2.1-201ENST00000458762 69 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.650-201ENST00000459002 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 RNU7-57P-201ENST00000459540 60 ntBASIC1.77□□□□□ -2.13
CLK1P49759 RNU6-221P-201ENST00000459541 99 ntBASIC1.77□□□□□ -2.13
CLK1P49759 AC010531.2-201ENST00000465012 153 ntBASIC1.77□□□□□ -2.13
CLK1P49759 RNU6-138P-201ENST00000515952 107 ntBASIC1.77□□□□□ -2.13
CLK1P49759 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.777-201ENST00000516982 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 MIR4753-201ENST00000585119 83 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.771-201ENST00000598668 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.77□□□□□ -2.13
CLK1P49759 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.77□□□□□ -2.13
CLK1P49759 Y_RNA.789-201ENST00000622480 102 ntBASIC1.77□□□□□ -2.13
CLK1P49759 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.77□□□□□ -2.13
CLK1P49759 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
CLK1P49759 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CLK1P49759 AL161722.3-201ENST00000605789 2983 ntBASIC1.76□□□□□ -2.13
CLK1P49759 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
CLK1P49759 Y_RNA.122-201ENST00000363331 96 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RNU6-200P-201ENST00000364743 107 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RNU6-662P-201ENST00000384253 104 ntBASIC1.76□□□□□ -2.13
CLK1P49759 AL355796.1-201ENST00000406706 323 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RNU2-2P-201ENST00000410396 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RNU2-61P-201ENST00000411069 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RNU2-64P-201ENST00000411315 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.76□□□□□ -2.13
CLK1P49759 RPL36AP21-201ENST00000490372 323 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RPS29P21-201ENST00000496272 170 ntBASIC1.76□□□□□ -2.13
CLK1P49759 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.76□□□□□ -2.13
CLK1P49759 AC107393.1-201ENST00000512403 346 ntBASIC1.76□□□□□ -2.13
CLK1P49759 SNORD116-28-201ENST00000516123 91 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RNU1-41P-201ENST00000516161 162 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RNU1-48P-201ENST00000516400 162 ntBASIC1.76□□□□□ -2.13
CLK1P49759 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.76□□□□□ -2.13
CLK1P49759 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.76□□□□□ -2.13
CLK1P49759 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
CLK1P49759 AL162424.1-201ENST00000602325 221 ntBASIC1.76□□□□□ -2.13
CLK1P49759 AC006380.1-201ENST00000603598 186 ntBASIC1.76□□□□□ -2.13
CLK1P49759 AC037487.3-201ENST00000606668 112 ntBASIC1.76□□□□□ -2.13
CLK1P49759 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.76□□□□□ -2.13
CLK1P49759 U2.15-201ENST00000611544 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.16-201ENST00000613119 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 AL442067.1-201ENST00000613261 223 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.12-201ENST00000613778 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.20-201ENST00000613956 192 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.9-201ENST00000615427 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.11-201ENST00000616345 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.2-201ENST00000616535 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.3-201ENST00000617785 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.19-201ENST00000618602 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RNU2-1-201ENST00000618664 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.6-201ENST00000619225 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.5-201ENST00000619465 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 U2.10-201ENST00000620268 191 ntBASIC1.76□□□□□ -2.13
CLK1P49759 snoZ196.1-201ENST00000625269 89 ntBASIC1.76□□□□□ -2.13
CLK1P49759 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms