Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
CENPAP49450 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CENPAP49450 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CENPAP49450 RNU6-117P-201ENST00000365415 107 ntBASIC1.87□□□□□ -2.11
CENPAP49450 SNORA70B-201ENST00000384210 135 ntBASIC1.87□□□□□ -2.11
CENPAP49450 SNORD116-13-201ENST00000384408 92 ntBASIC1.87□□□□□ -2.11
CENPAP49450 RNU2-38P-201ENST00000410856 79 ntBASIC1.87□□□□□ -2.11
CENPAP49450 AL135786.1-201ENST00000415892 214 ntBASIC1.87□□□□□ -2.11
CENPAP49450 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
CENPAP49450 RPS20P10-201ENST00000451209 253 ntBASIC1.87□□□□□ -2.11
CENPAP49450 RNU1-41P-201ENST00000516161 162 ntBASIC1.87□□□□□ -2.11
CENPAP49450 RNU1-48P-201ENST00000516400 162 ntBASIC1.87□□□□□ -2.11
CENPAP49450 SUB1P4-201ENST00000566062 339 ntBASIC1.87□□□□□ -2.11
CENPAP49450 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.87□□□□□ -2.11
CENPAP49450 AC068647.2-201ENST00000637380 353 ntBASIC1.87□□□□□ -2.11
CENPAP49450 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CENPAP49450 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
CENPAP49450 MIR335-201ENST00000362173 94 ntBASIC1.86□□□□□ -2.11
CENPAP49450 Y_RNA.456-201ENST00000384232 111 ntBASIC1.86□□□□□ -2.11
CENPAP49450 RNU6-662P-201ENST00000384253 104 ntBASIC1.86□□□□□ -2.11
CENPAP49450 MIR520A-201ENST00000384862 85 ntBASIC1.86□□□□□ -2.11
CENPAP49450 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.86□□□□□ -2.11
CENPAP49450 AC245047.4-201ENST00000433189 144 ntBASIC1.86□□□□□ -2.11
CENPAP49450 SNORD127-201ENST00000458892 86 ntBASIC1.86□□□□□ -2.11
CENPAP49450 RNU7-94P-201ENST00000459576 63 ntBASIC1.86□□□□□ -2.11
CENPAP49450 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
CENPAP49450 AC012433.1-201ENST00000588916 398 ntBASIC1.86□□□□□ -2.11
CENPAP49450 MIR6715A-201ENST00000615929 79 ntBASIC1.86□□□□□ -2.11
CENPAP49450 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
CENPAP49450 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
CENPAP49450 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.86□□□□□ -2.11
CENPAP49450 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
CENPAP49450 AC092881.1-201ENST00000638218 2733 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC018630.2-201ENST00000534866 2403 ntBASIC1.85□□□□□ -2.11
CENPAP49450 Y_RNA.193-201ENST00000363979 102 ntBASIC1.85□□□□□ -2.11
CENPAP49450 Y_RNA.267-201ENST00000364679 109 ntBASIC1.85□□□□□ -2.11
CENPAP49450 Y_RNA.368-201ENST00000365547 113 ntBASIC1.85□□□□□ -2.11
CENPAP49450 RNA5SP109-201ENST00000391010 116 ntBASIC1.85□□□□□ -2.11
CENPAP49450 RN7SKP192-201ENST00000411291 327 ntBASIC1.85□□□□□ -2.11
CENPAP49450 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.85□□□□□ -2.11
CENPAP49450 AC233266.1-201ENST00000454518 96 ntBASIC1.85□□□□□ -2.11
CENPAP49450 RNU6-1132P-201ENST00000459214 107 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.85□□□□□ -2.11
CENPAP49450 SNORA27.4-201ENST00000516650 95 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC136628.3-201ENST00000521868 290 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC015720.1-201ENST00000565251 277 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC005972.2-201ENST00000604690 348 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC004832.4-201ENST00000608952 331 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC062037.2-201ENST00000610137 73 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC242852.1-201ENST00000612151 96 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC244015.1-201ENST00000622301 99 ntBASIC1.85□□□□□ -2.11
CENPAP49450 AC064859.1-201ENST00000624741 174 ntBASIC1.85□□□□□ -2.11
CENPAP49450 MIR6079-201ENST00000635807 62 ntBASIC1.85□□□□□ -2.11
CENPAP49450 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.11
CENPAP49450 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CENPAP49450 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CENPAP49450 Y_RNA.44-201ENST00000362676 108 ntBASIC1.84□□□□□ -2.11
CENPAP49450 Y_RNA.54-201ENST00000362766 105 ntBASIC1.84□□□□□ -2.11
CENPAP49450 RNU6-112P-201ENST00000363599 104 ntBASIC1.84□□□□□ -2.11
CENPAP49450 Y_RNA.310-201ENST00000365063 113 ntBASIC1.84□□□□□ -2.11
CENPAP49450 MIR1261-201ENST00000408659 82 ntBASIC1.84□□□□□ -2.11
CENPAP49450 RNA5SP100-201ENST00000410903 110 ntBASIC1.84□□□□□ -2.11
CENPAP49450 RNA5SP59-201ENST00000410922 110 ntBASIC1.84□□□□□ -2.11
CENPAP49450 Y_RNA.621-201ENST00000411065 96 ntBASIC1.84□□□□□ -2.11
CENPAP49450 AL162725.1-201ENST00000435405 301 ntBASIC1.84□□□□□ -2.11
CENPAP49450 AL135790.2-201ENST00000437701 267 ntBASIC1.84□□□□□ -2.11
CENPAP49450 RPL39P38-201ENST00000467018 153 ntBASIC1.84□□□□□ -2.11
CENPAP49450 AC091021.1-201ENST00000468051 388 ntBASIC1.84□□□□□ -2.11
CENPAP49450 RPS26P45-201ENST00000471748 340 ntBASIC1.84□□□□□ -2.11
CENPAP49450 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
CENPAP49450 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
CENPAP49450 Y_RNA.668-201ENST00000516233 93 ntBASIC1.84□□□□□ -2.11
CENPAP49450 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.84□□□□□ -2.11
CENPAP49450 RNU6-1096P-201ENST00000517089 102 ntBASIC1.84□□□□□ -2.11
CENPAP49450 AC004817.2-201ENST00000561794 651 ntBASIC1.84□□□□□ -2.11
CENPAP49450 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.84□□□□□ -2.11
CENPAP49450 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.84□□□□□ -2.11
CENPAP49450 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.84□□□□□ -2.11
CENPAP49450 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
CENPAP49450 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.84□□□□□ -2.11
CENPAP49450 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CENPAP49450 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CENPAP49450 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
CENPAP49450 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
CENPAP49450 Y_RNA.14-201ENST00000362415 103 ntBASIC1.83□□□□□ -2.12
CENPAP49450 RNU6-1048P-201ENST00000364054 107 ntBASIC1.83□□□□□ -2.12
CENPAP49450 MIR520G-201ENST00000385064 90 ntBASIC1.83□□□□□ -2.12
CENPAP49450 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
CENPAP49450 AC245047.3-201ENST00000429428 127 ntBASIC1.83□□□□□ -2.12
CENPAP49450 UBL5P3-201ENST00000475112 231 ntBASIC1.83□□□□□ -2.12
CENPAP49450 RNU6-1291P-201ENST00000516591 104 ntBASIC1.83□□□□□ -2.12
CENPAP49450 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
CENPAP49450 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
CENPAP49450 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.83□□□□□ -2.12
CENPAP49450 U2.14-201ENST00000615943 113 ntBASIC1.83□□□□□ -2.12
CENPAP49450 AC134026.1-201ENST00000623249 2239 ntBASIC1.83□□□□□ -2.12
CENPAP49450 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CENPAP49450 RNU6-801P-201ENST00000364087 105 ntBASIC1.82□□□□□ -2.12
CENPAP49450 Y_RNA.477-201ENST00000384352 108 ntBASIC1.82□□□□□ -2.12
CENPAP49450 MTCO2P33-201ENST00000402100 465 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms