Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR520G-201ENST00000385064 90 ntBASIC2.02□□□□□ -2.09
SOX2P48431 SNORD23.1-201ENST00000408212 104 ntBASIC2.02□□□□□ -2.09
SOX2P48431 MIR1283-2-201ENST00000408621 87 ntBASIC2.02□□□□□ -2.09
SOX2P48431 SNORA36B-201ENST00000410438 131 ntBASIC2.02□□□□□ -2.09
SOX2P48431 RNU2-64P-201ENST00000411315 191 ntBASIC2.02□□□□□ -2.09
SOX2P48431 AC099677.2-201ENST00000436385 175 ntBASIC2.02□□□□□ -2.09
SOX2P48431 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.02□□□□□ -2.09
SOX2P48431 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.02□□□□□ -2.09
SOX2P48431 RPL23AP54-201ENST00000495129 419 ntBASIC2.02□□□□□ -2.09
SOX2P48431 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.02□□□□□ -2.09
SOX2P48431 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.02□□□□□ -2.09
SOX2P48431 RNU7-128P-201ENST00000517247 62 ntBASIC2.02□□□□□ -2.09
SOX2P48431 AC127455.1-201ENST00000565496 145 ntBASIC2.02□□□□□ -2.09
SOX2P48431 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.02□□□□□ -2.09
SOX2P48431 Y_RNA.802-201ENST00000614892 130 ntBASIC2.02□□□□□ -2.09
SOX2P48431 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX2P48431 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX2P48431 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
SOX2P48431 RNU6-923P-201ENST00000364753 107 ntBASIC2.01□□□□□ -2.09
SOX2P48431 SNORA72-201ENST00000384339 132 ntBASIC2.01□□□□□ -2.09
SOX2P48431 SNORA8.3-201ENST00000384679 139 ntBASIC2.01□□□□□ -2.09
SOX2P48431 AC063976.3-201ENST00000426849 329 ntBASIC2.01□□□□□ -2.09
SOX2P48431 HMGN2P3-201ENST00000433603 273 ntBASIC2.01□□□□□ -2.09
SOX2P48431 HMGN2P5-201ENST00000436882 273 ntBASIC2.01□□□□□ -2.09
SOX2P48431 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.01□□□□□ -2.09
SOX2P48431 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.01□□□□□ -2.09
SOX2P48431 RNY3P16-201ENST00000516338 101 ntBASIC2.01□□□□□ -2.09
SOX2P48431 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.01□□□□□ -2.09
SOX2P48431 AC100767.1-201ENST00000528178 123 ntBASIC2.01□□□□□ -2.09
SOX2P48431 CBX3P4-201ENST00000538909 354 ntBASIC2.01□□□□□ -2.09
SOX2P48431 EIF4BP1-201ENST00000554881 351 ntBASIC2.01□□□□□ -2.09
SOX2P48431 MIR4298-201ENST00000584380 73 ntBASIC2.01□□□□□ -2.09
SOX2P48431 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.01□□□□□ -2.09
SOX2P48431 AC022513.1-201ENST00000624512 117 ntBASIC2.01□□□□□ -2.09
SOX2P48431 U6.108-201ENST00000637764 58 ntBASIC2.01□□□□□ -2.09
SOX2P48431 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.01□□□□□ -2.09
SOX2P48431 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SOX2P48431 MIR367-201ENST00000362299 68 ntBASIC2□□□□□ -2.09
SOX2P48431 RNU4-17P-201ENST00000365598 141 ntBASIC2□□□□□ -2.09
SOX2P48431 RNU6-493P-201ENST00000391321 108 ntBASIC2□□□□□ -2.09
SOX2P48431 RPS4XP11-201ENST00000446897 772 ntBASIC2□□□□□ -2.09
SOX2P48431 RNU7-94P-201ENST00000459576 63 ntBASIC2□□□□□ -2.09
SOX2P48431 AC091021.1-201ENST00000468051 388 ntBASIC2□□□□□ -2.09
SOX2P48431 RPS26P45-201ENST00000471748 340 ntBASIC2□□□□□ -2.09
SOX2P48431 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2□□□□□ -2.09
SOX2P48431 RNU6-1096P-201ENST00000517089 102 ntBASIC2□□□□□ -2.09
SOX2P48431 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SOX2P48431 MIR4319-201ENST00000577285 85 ntBASIC2□□□□□ -2.09
SOX2P48431 MIR5688-201ENST00000580619 83 ntBASIC2□□□□□ -2.09
SOX2P48431 AC069114.2-201ENST00000604699 304 ntBASIC2□□□□□ -2.09
SOX2P48431 AC046143.2-201ENST00000609789 160 ntBASIC2□□□□□ -2.09
SOX2P48431 MIR6840-201ENST00000611937 71 ntBASIC2□□□□□ -2.09
SOX2P48431 MIR7106-201ENST00000612419 65 ntBASIC2□□□□□ -2.09
SOX2P48431 AC004792.1-201ENST00000614523 137 ntBASIC2□□□□□ -2.09
SOX2P48431 AC018630.2-201ENST00000534866 2403 ntBASIC2□□□□□ -2.09
SOX2P48431 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SOX2P48431 SNORA80A-201ENST00000363922 136 ntBASIC1.99□□□□□ -2.09
SOX2P48431 MIR562-201ENST00000384894 95 ntBASIC1.99□□□□□ -2.09
SOX2P48431 MIR526A2-201ENST00000390198 65 ntBASIC1.99□□□□□ -2.09
SOX2P48431 RNU6-437P-201ENST00000459408 95 ntBASIC1.99□□□□□ -2.09
SOX2P48431 AC104435.1-201ENST00000483483 166 ntBASIC1.99□□□□□ -2.09
SOX2P48431 AL163195.1-201ENST00000496941 348 ntBASIC1.99□□□□□ -2.09
SOX2P48431 RNU7-193P-201ENST00000516723 65 ntBASIC1.99□□□□□ -2.09
SOX2P48431 AP002392.1-201ENST00000537692 208 ntBASIC1.99□□□□□ -2.09
SOX2P48431 AC011604.1-201ENST00000545978 196 ntBASIC1.99□□□□□ -2.09
SOX2P48431 MIR4724-201ENST00000579485 89 ntBASIC1.99□□□□□ -2.09
SOX2P48431 AC098479.1-201ENST00000609225 154 ntBASIC1.99□□□□□ -2.09
SOX2P48431 MIR6766-201ENST00000622641 72 ntBASIC1.99□□□□□ -2.09
SOX2P48431 MIR6079-201ENST00000635807 62 ntBASIC1.99□□□□□ -2.09
SOX2P48431 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.99□□□□□ -2.09
SOX2P48431 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
SOX2P48431 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SOX2P48431 AC068700.1-201ENST00000565862 3754 ntBASIC1.98□□□□□ -2.09
SOX2P48431 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SOX2P48431 RNU4-10P-201ENST00000364383 140 ntBASIC1.98□□□□□ -2.09
SOX2P48431 MIR626-201ENST00000385032 94 ntBASIC1.98□□□□□ -2.09
SOX2P48431 MT-TR-201ENST00000387439 65 ntBASIC1.98□□□□□ -2.09
SOX2P48431 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SOX2P48431 COX6CP10-201ENST00000416832 224 ntBASIC1.98□□□□□ -2.09
SOX2P48431 PIGPP3-201ENST00000425307 415 ntBASIC1.98□□□□□ -2.09
SOX2P48431 AC234781.5-201ENST00000508429 271 ntBASIC1.98□□□□□ -2.09
SOX2P48431 RNA5SP148-201ENST00000516527 94 ntBASIC1.98□□□□□ -2.09
SOX2P48431 SNORA31.25-201ENST00000517242 134 ntBASIC1.98□□□□□ -2.09
SOX2P48431 MIR4529-201ENST00000578110 78 ntBASIC1.98□□□□□ -2.09
SOX2P48431 MIR5094-201ENST00000578766 85 ntBASIC1.98□□□□□ -2.09
SOX2P48431 AC091178.2-201ENST00000584401 117 ntBASIC1.98□□□□□ -2.09
SOX2P48431 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.98□□□□□ -2.09
SOX2P48431 AC103810.6-201ENST00000606708 136 ntBASIC1.98□□□□□ -2.09
SOX2P48431 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.98□□□□□ -2.09
SOX2P48431 MIR6817-201ENST00000615588 66 ntBASIC1.98□□□□□ -2.09
SOX2P48431 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SOX2P48431 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SOX2P48431 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SOX2P48431 AC100821.1-201ENST00000523153 2479 ntBASIC1.97□□□□□ -2.09
SOX2P48431 AC016717.2-201ENST00000609089 5141 ntBASIC1.97□□□□□ -2.09
SOX2P48431 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SOX2P48431 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SOX2P48431 Y_RNA.24-201ENST00000362508 103 ntBASIC1.97□□□□□ -2.09
SOX2P48431 RNA5SP68-201ENST00000363885 119 ntBASIC1.97□□□□□ -2.09
SOX2P48431 RNU6-1019P-201ENST00000364424 107 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms