Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR613-201ENST00000385248 95 ntBASIC0.01□□□□□ -2.41
RPL28P46779 RNU4-55P-201ENST00000410731 137 ntBASIC0.01□□□□□ -2.41
RPL28P46779 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.01□□□□□ -2.41
RPL28P46779 MTATP6P13-201ENST00000438531 667 ntBASIC0.01□□□□□ -2.41
RPL28P46779 UQCRBP2-201ENST00000447827 297 ntBASIC0.01□□□□□ -2.41
RPL28P46779 AC125232.2-201ENST00000592457 143 ntBASIC0.01□□□□□ -2.41
RPL28P46779 RBM11P1-201ENST00000604951 799 ntBASIC0.01□□□□□ -2.41
RPL28P46779 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
RPL28P46779 AC092954.2-201ENST00000609103 430 ntBASIC0.01□□□□□ -2.41
RPL28P46779 AL357075.2-201ENST00000614906 189 ntBASIC0.01□□□□□ -2.41
RPL28P46779 RNU6-222P-201ENST00000362438 107 ntBASIC0□□□□□ -2.41
RPL28P46779 RNU6-454P-201ENST00000364292 107 ntBASIC0□□□□□ -2.41
RPL28P46779 RNU6-580P-201ENST00000365159 107 ntBASIC0□□□□□ -2.41
RPL28P46779 Y_RNA.361-201ENST00000365515 120 ntBASIC0□□□□□ -2.41
RPL28P46779 Y_RNA.370-201ENST00000365589 108 ntBASIC0□□□□□ -2.41
RPL28P46779 MIR520F-201ENST00000384824 87 ntBASIC0□□□□□ -2.41
RPL28P46779 MIR522-201ENST00000385071 87 ntBASIC0□□□□□ -2.41
RPL28P46779 SNORD83.1-201ENST00000411362 77 ntBASIC0□□□□□ -2.41
RPL28P46779 AL390729.2-201ENST00000416137 156 ntBASIC0□□□□□ -2.41
RPL28P46779 USMG5P1-201ENST00000425964 177 ntBASIC0□□□□□ -2.41
RPL28P46779 USP9YP16-201ENST00000430287 407 ntBASIC0□□□□□ -2.41
RPL28P46779 ERLEC1P1-201ENST00000433806 578 ntBASIC0□□□□□ -2.41
RPL28P46779 MTND1P26-201ENST00000440488 538 ntBASIC0□□□□□ -2.41
RPL28P46779 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0□□□□□ -2.41
RPL28P46779 USP9YP23-201ENST00000455085 407 ntBASIC0□□□□□ -2.41
RPL28P46779 NDUFA4P2-201ENST00000489989 244 ntBASIC0□□□□□ -2.41
RPL28P46779 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0□□□□□ -2.41
RPL28P46779 SNORD45.4-201ENST00000516629 73 ntBASIC0□□□□□ -2.41
RPL28P46779 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0□□□□□ -2.41
RPL28P46779 AC090617.3-201ENST00000573670 475 ntBASIC0□□□□□ -2.41
RPL28P46779 AL355375.2-201ENST00000574825 175 ntBASIC0□□□□□ -2.41
RPL28P46779 AC124303.1-201ENST00000605703 360 ntBASIC0□□□□□ -2.41
RPL28P46779 AC019193.3-201ENST00000609144 554 ntBASIC0□□□□□ -2.41
RPL28P46779 AC104260.1-201ENST00000616660 539 ntBASIC0□□□□□ -2.41
RPL28P46779 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0□□□□□ -2.41
RPL28P46779 AC091925.1-201ENST00000623204 462 ntBASIC0□□□□□ -2.41
RPL28P46779 MIR4315-1-201ENST00000636800 73 ntBASIC0□□□□□ -2.41
RPL28P46779 MIR4315-2-201ENST00000640925 73 ntBASIC0□□□□□ -2.41
RPL28P46779 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.01□□□□□ -2.41
RPL28P46779 MIR377-201ENST00000362145 69 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 RNA5SP517-201ENST00000364724 117 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 SNORA40.8-201ENST00000411034 126 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.01□□□□□ -2.41
RPL28P46779 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.01□□□□□ -2.41
RPL28P46779 RNU6-863P-201ENST00000515989 104 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 SNORA25.12-201ENST00000516202 82 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.01□□□□□ -2.41
RPL28P46779 MTND1P24-201ENST00000552175 861 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 EIF1P4-201ENST00000572664 335 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 Z69908.1-201ENST00000622603 247 ntBASIC-0.01□□□□□ -2.41
RPL28P46779 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.01□□□□□ -2.41
RPL28P46779 RNU6-595P-201ENST00000363944 107 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 RNU6-396P-201ENST00000365369 105 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 RNU6-596P-201ENST00000365395 98 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
RPL28P46779 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 SNORD71-201ENST00000411292 86 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 EIF1P2-201ENST00000428233 350 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 HMGN2P32-201ENST00000444648 269 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 RNU6-977P-201ENST00000516411 103 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 AC069113.3-201ENST00000521019 150 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.02□□□□□ -2.41
RPL28P46779 AC018448.1-201ENST00000552843 316 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 ZNF519P2-201ENST00000557032 169 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 AC012433.1-201ENST00000588916 398 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 AC024933.1-201ENST00000608472 348 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.02□□□□□ -2.41
RPL28P46779 ZNF299P-201ENST00000406845 1804 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 SNORA42.1-201ENST00000363515 137 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 RNU6-815P-201ENST00000384080 113 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 MT-TN-201ENST00000387400 73 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 SNORD28B-201ENST00000390993 75 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.03□□□□□ -2.41
RPL28P46779 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.03□□□□□ -2.41
RPL28P46779 snoU13.21-201ENST00000459368 105 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 AC093534.1-201ENST00000504977 132 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 AC116353.2-201ENST00000505332 712 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 AC010486.3-201ENST00000511602 785 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 RN7SKP298-201ENST00000515950 94 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 RNU6-415P-201ENST00000516252 97 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 MIR548AR-201ENST00000582191 57 ntBASIC-0.03□□□□□ -2.41
RPL28P46779 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.04□□□□□ -2.42
RPL28P46779 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
RPL28P46779 SNORD50B-201ENST00000364995 70 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms