Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 Y_RNA.512-201ENST00000384518 102 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 MIR520A-201ENST00000384862 85 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PTPN9P43378 RNU6-1186P-201ENST00000410429 97 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 RNA5SP100-201ENST00000410903 110 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 RNA5SP59-201ENST00000410922 110 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 SERF1AP1-201ENST00000514575 187 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.92□□□□□ -2.1
PTPN9P43378 RPL21P9-201ENST00000556149 474 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
PTPN9P43378 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 AC010900.2-201ENST00000604508 210 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 AP001282.2-201ENST00000616149 309 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.92□□□□□ -2.1
PTPN9P43378 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PTPN9P43378 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.91□□□□□ -2.1
PTPN9P43378 RNU6-196P-201ENST00000384315 107 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 RNU6-463P-201ENST00000384340 107 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 MTCO1P5-201ENST00000433573 344 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 AL163195.1-201ENST00000496941 348 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 RNU6-191P-201ENST00000516295 94 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 RNU6-570P-201ENST00000517051 105 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 U4.1-201ENST00000620349 87 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 AC018630.2-201ENST00000534866 2403 ntBASIC1.91□□□□□ -2.1
PTPN9P43378 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.9□□□□□ -2.1
PTPN9P43378 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PTPN9P43378 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PTPN9P43378 UBE2WP1-201ENST00000362030 340 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 SNORA25.1-201ENST00000362326 128 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 RNU4-80P-201ENST00000363200 141 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 Y_RNA.144-201ENST00000363521 113 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 Y_RNA.310-201ENST00000365063 113 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 Y_RNA.452-201ENST00000384202 108 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 RNU6-514P-201ENST00000384208 107 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 RNU6-296P-201ENST00000384608 107 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 MIR520G-201ENST00000385064 90 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 MIR9-3-201ENST00000385084 90 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 MT-TW-201ENST00000387382 68 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 AL162725.1-201ENST00000435405 301 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 Y_RNA.668-201ENST00000516233 93 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 AC073413.2-201ENST00000604332 360 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 AL078604.3-201ENST00000615580 211 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 7SK.10-201ENST00000621414 298 ntBASIC1.9□□□□□ -2.11
PTPN9P43378 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PTPN9P43378 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PTPN9P43378 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PTPN9P43378 AL356292.1-201ENST00000283110 373 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AL391987.6-201ENST00000305671 199 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 Y_RNA.288-201ENST00000364854 92 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 Y_RNA.396-201ENST00000383949 103 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 Y_RNA.483-201ENST00000384380 101 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 RNU6-376P-201ENST00000384731 106 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 RNU6-855P-201ENST00000410395 104 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AC003989.2-201ENST00000440224 169 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
PTPN9P43378 RPL23AP6-201ENST00000446637 472 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 RPS20P10-201ENST00000451209 253 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 RPS29P11-201ENST00000496507 171 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 RNA5SP481-201ENST00000516814 122 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AC136628.3-201ENST00000521868 290 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AL358944.1-201ENST00000528537 144 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AC022254.1-201ENST00000567857 235 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 MIR3145-201ENST00000580727 82 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AC091178.2-201ENST00000584401 117 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AC004832.4-201ENST00000608952 331 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.89□□□□□ -2.11
PTPN9P43378 AC245060.5-201ENST00000610778 3293 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 Y_RNA.16-201ENST00000362421 102 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 Y_RNA.341-201ENST00000365341 102 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.88□□□□□ -2.11
PTPN9P43378 RNU6-950P-201ENST00000384651 107 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 U8.13-201ENST00000390842 128 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
PTPN9P43378 RNU6-341P-201ENST00000516973 96 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 AC004817.2-201ENST00000561794 651 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 AC015720.1-201ENST00000565251 277 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.88□□□□□ -2.11
PTPN9P43378 MIR6079-201ENST00000635807 62 ntBASIC1.88□□□□□ -2.11
PTPN9P43378 Y_RNA.193-201ENST00000363979 102 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 Y_RNA.237-201ENST00000364439 102 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 RNU6-1323P-201ENST00000384025 107 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 RPS27P1-201ENST00000450552 247 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 AC091959.1-201ENST00000495857 238 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 SNORA27.4-201ENST00000516650 95 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 RNU7-116P-201ENST00000516940 62 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 DEFB108E-201ENST00000524692 240 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
PTPN9P43378 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms