Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR548F1-201ENST00000408667 84 ntBASIC0.68□□□□□ -2.3
SSR1P43307 MIR1298-201ENST00000408783 112 ntBASIC0.68□□□□□ -2.3
SSR1P43307 RNU6-1050P-201ENST00000410388 107 ntBASIC0.68□□□□□ -2.3
SSR1P43307 RNA5SP475-201ENST00000410568 110 ntBASIC0.68□□□□□ -2.3
SSR1P43307 AC093019.1-201ENST00000443135 252 ntBASIC0.68□□□□□ -2.3
SSR1P43307 MTND3P10-201ENST00000450967 341 ntBASIC0.68□□□□□ -2.3
SSR1P43307 RPS29P25-201ENST00000481709 171 ntBASIC0.68□□□□□ -2.3
SSR1P43307 RNU6-1213P-201ENST00000517075 94 ntBASIC0.68□□□□□ -2.3
SSR1P43307 AC105029.1-201ENST00000520250 669 ntBASIC0.68□□□□□ -2.3
SSR1P43307 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
SSR1P43307 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
SSR1P43307 RNU6-94P-201ENST00000607728 107 ntBASIC0.68□□□□□ -2.3
SSR1P43307 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.68□□□□□ -2.3
SSR1P43307 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
SSR1P43307 RNA5SP264-201ENST00000363115 107 ntBASIC0.67□□□□□ -2.3
SSR1P43307 RNU6-961P-201ENST00000363893 105 ntBASIC0.67□□□□□ -2.3
SSR1P43307 RNU1-93P-201ENST00000364704 169 ntBASIC0.67□□□□□ -2.3
SSR1P43307 RNU6-1013P-201ENST00000384180 107 ntBASIC0.67□□□□□ -2.3
SSR1P43307 MIR520E-201ENST00000384867 87 ntBASIC0.67□□□□□ -2.3
SSR1P43307 MIR1185-1-201ENST00000408598 86 ntBASIC0.67□□□□□ -2.3
SSR1P43307 MLLT10P1-201ENST00000418346 262 ntBASIC0.67□□□□□ -2.3
SSR1P43307 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.67□□□□□ -2.3
SSR1P43307 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.67□□□□□ -2.3
SSR1P43307 AL162725.1-201ENST00000435405 301 ntBASIC0.67□□□□□ -2.3
SSR1P43307 ELOCP24-201ENST00000456370 334 ntBASIC0.67□□□□□ -2.3
SSR1P43307 RNU6-408P-201ENST00000515910 100 ntBASIC0.67□□□□□ -2.3
SSR1P43307 SNORA25.10-201ENST00000515926 124 ntBASIC0.67□□□□□ -2.3
SSR1P43307 RNU6-718P-201ENST00000516166 105 ntBASIC0.67□□□□□ -2.3
SSR1P43307 RNU6-1337P-201ENST00000516525 95 ntBASIC0.67□□□□□ -2.3
SSR1P43307 AC018638.8-201ENST00000588755 281 ntBASIC0.67□□□□□ -2.3
SSR1P43307 7SK.10-201ENST00000621414 298 ntBASIC0.67□□□□□ -2.3
SSR1P43307 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SSR1P43307 MIR103A2-201ENST00000362154 78 ntBASIC0.66□□□□□ -2.3
SSR1P43307 Y_RNA.86-201ENST00000363020 111 ntBASIC0.66□□□□□ -2.3
SSR1P43307 RNU6-833P-201ENST00000363486 107 ntBASIC0.66□□□□□ -2.3
SSR1P43307 Y_RNA.453-201ENST00000384223 109 ntBASIC0.66□□□□□ -2.3
SSR1P43307 MIR181A1-201ENST00000385026 110 ntBASIC0.66□□□□□ -2.3
SSR1P43307 MIR520G-201ENST00000385064 90 ntBASIC0.66□□□□□ -2.3
SSR1P43307 SNORD12B-201ENST00000410433 91 ntBASIC0.66□□□□□ -2.3
SSR1P43307 CYCTP-201ENST00000504253 315 ntBASIC0.66□□□□□ -2.3
SSR1P43307 RNU6-1016P-201ENST00000516689 94 ntBASIC0.66□□□□□ -2.3
SSR1P43307 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
SSR1P43307 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
SSR1P43307 AC131055.1-201ENST00000584626 316 ntBASIC0.66□□□□□ -2.3
SSR1P43307 AC136443.5-201ENST00000603741 370 ntBASIC0.66□□□□□ -2.3
SSR1P43307 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
SSR1P43307 AC005828.6-201ENST00000606610 232 ntBASIC0.66□□□□□ -2.3
SSR1P43307 AC004467.1-201ENST00000615678 330 ntBASIC0.66□□□□□ -2.3
SSR1P43307 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.3
SSR1P43307 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
SSR1P43307 AC074085.1-201ENST00000413598 418 ntBASIC0.65□□□□□ -2.31
SSR1P43307 AL139396.1-201ENST00000421137 167 ntBASIC0.65□□□□□ -2.31
SSR1P43307 RNU6-329P-201ENST00000459618 107 ntBASIC0.65□□□□□ -2.31
SSR1P43307 RNU6-966P-201ENST00000516479 104 ntBASIC0.65□□□□□ -2.31
SSR1P43307 AC109810.1-201ENST00000534066 224 ntBASIC0.65□□□□□ -2.31
SSR1P43307 SNORD115-30-201ENST00000364117 82 ntBASIC0.64□□□□□ -2.31
SSR1P43307 SNORD114-22-201ENST00000365423 72 ntBASIC0.64□□□□□ -2.31
SSR1P43307 RNA5SP95-201ENST00000410319 137 ntBASIC0.64□□□□□ -2.31
SSR1P43307 RPS29P1-201ENST00000465274 159 ntBASIC0.64□□□□□ -2.31
SSR1P43307 AC074133.1-201ENST00000515696 183 ntBASIC0.64□□□□□ -2.31
SSR1P43307 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.64□□□□□ -2.31
SSR1P43307 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
SSR1P43307 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
SSR1P43307 AC007014.2-201ENST00000615581 479 ntBASIC0.64□□□□□ -2.31
SSR1P43307 MIR3688-2-201ENST00000636963 87 ntBASIC0.64□□□□□ -2.31
SSR1P43307 CASC19-280ENST00000642102 1351 ntBASIC0.63□□□□□ -2.31
SSR1P43307 RNU6-1301P-201ENST00000362724 104 ntBASIC0.63□□□□□ -2.31
SSR1P43307 Y_RNA.101-201ENST00000363154 102 ntBASIC0.63□□□□□ -2.31
SSR1P43307 Y_RNA.157-201ENST00000363638 102 ntBASIC0.63□□□□□ -2.31
SSR1P43307 Y_RNA.164-201ENST00000363709 102 ntBASIC0.63□□□□□ -2.31
SSR1P43307 RNY3P11-201ENST00000364153 102 ntBASIC0.63□□□□□ -2.31
SSR1P43307 Y_RNA.243-201ENST00000364481 109 ntBASIC0.63□□□□□ -2.31
SSR1P43307 RNU6-99P-201ENST00000364721 107 ntBASIC0.63□□□□□ -2.31
SSR1P43307 RNU6-601P-201ENST00000384540 107 ntBASIC0.63□□□□□ -2.31
SSR1P43307 MIR562-201ENST00000384894 95 ntBASIC0.63□□□□□ -2.31
SSR1P43307 MIR520C-201ENST00000385005 87 ntBASIC0.63□□□□□ -2.31
SSR1P43307 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
SSR1P43307 MIR548K-201ENST00000408406 116 ntBASIC0.63□□□□□ -2.31
SSR1P43307 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
SSR1P43307 RNU6-1304P-201ENST00000411374 106 ntBASIC0.63□□□□□ -2.31
SSR1P43307 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
SSR1P43307 MTCYBP10-201ENST00000424905 650 ntBASIC0.63□□□□□ -2.31
SSR1P43307 MTND3P21-201ENST00000433774 331 ntBASIC0.63□□□□□ -2.31
SSR1P43307 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.63□□□□□ -2.31
SSR1P43307 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
SSR1P43307 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.63□□□□□ -2.31
SSR1P43307 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
SSR1P43307 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.63□□□□□ -2.31
SSR1P43307 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SSR1P43307 RNU6-654P-201ENST00000364373 107 ntBASIC0.62□□□□□ -2.31
SSR1P43307 RNY1P8-201ENST00000383970 114 ntBASIC0.62□□□□□ -2.31
SSR1P43307 AF235103.2-201ENST00000525753 346 ntBASIC0.62□□□□□ -2.31
SSR1P43307 AP003716.2-201ENST00000528260 108 ntBASIC0.62□□□□□ -2.31
SSR1P43307 AC080013.6-201ENST00000606185 215 ntBASIC0.62□□□□□ -2.31
SSR1P43307 AC068700.1-201ENST00000565862 3754 ntBASIC0.61□□□□□ -2.31
SSR1P43307 MIR410-201ENST00000362222 80 ntBASIC0.61□□□□□ -2.31
SSR1P43307 Y_RNA.318-201ENST00000365131 97 ntBASIC0.61□□□□□ -2.31
SSR1P43307 MIR1276-201ENST00000408707 83 ntBASIC0.61□□□□□ -2.31
SSR1P43307 RPL23AP50-201ENST00000434149 455 ntBASIC0.61□□□□□ -2.31
SSR1P43307 Z83846.1-201ENST00000446798 265 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms