Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL7P42-201ENST00000481005 679 ntBASIC-0.91□□□□□ -2.56
HTTP42858 RNU6-759P-201ENST00000516740 103 ntBASIC-0.91□□□□□ -2.56
HTTP42858 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.91□□□□□ -2.56
HTTP42858 MIR4264-201ENST00000583520 66 ntBASIC-0.91□□□□□ -2.56
HTTP42858 AL022154.1-201ENST00000604698 785 ntBASIC-0.91□□□□□ -2.56
HTTP42858 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.91□□□□□ -2.56
HTTP42858 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.91□□□□□ -2.56
HTTP42858 SNORA24-201ENST00000384096 131 ntBASIC-0.91□□□□□ -2.56
HTTP42858 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.91□□□□□ -2.56
HTTP42858 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.91□□□□□ -2.56
HTTP42858 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.91□□□□□ -2.56
HTTP42858 RNU7-57P-201ENST00000459540 60 ntBASIC-0.91□□□□□ -2.56
HTTP42858 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.91□□□□□ -2.56
HTTP42858 AC091951.3-201ENST00000504093 246 ntBASIC-0.91□□□□□ -2.56
HTTP42858 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.91□□□□□ -2.56
HTTP42858 RNU6-765P-201ENST00000516916 99 ntBASIC-0.91□□□□□ -2.56
HTTP42858 AC026421.1-201ENST00000519101 163 ntBASIC-0.91□□□□□ -2.56
HTTP42858 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.91□□□□□ -2.56
HTTP42858 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.91□□□□□ -2.56
HTTP42858 AC069431.2-201ENST00000604149 1099 ntBASIC-0.91□□□□□ -2.56
HTTP42858 AC138649.3-201ENST00000622154 254 ntBASIC-0.91□□□□□ -2.56
HTTP42858 RNU1-141P-201ENST00000364623 158 ntBASIC-0.92□□□□□ -2.56
HTTP42858 RNU6-359P-201ENST00000365466 108 ntBASIC-0.92□□□□□ -2.56
HTTP42858 MIR16-1-201ENST00000385271 89 ntBASIC-0.92□□□□□ -2.56
HTTP42858 SNORA26.5-201ENST00000391215 123 ntBASIC-0.92□□□□□ -2.56
HTTP42858 MIR8485-201ENST00000401372 91 ntBASIC-0.92□□□□□ -2.56
HTTP42858 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.92□□□□□ -2.56
HTTP42858 RNU6-714P-201ENST00000516963 103 ntBASIC-0.92□□□□□ -2.56
HTTP42858 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.92□□□□□ -2.56
HTTP42858 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.92□□□□□ -2.56
HTTP42858 MIR335-201ENST00000362173 94 ntBASIC-0.92□□□□□ -2.56
HTTP42858 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.92□□□□□ -2.56
HTTP42858 SNORD38C-201ENST00000384381 69 ntBASIC-0.92□□□□□ -2.56
HTTP42858 MIR586-201ENST00000385035 97 ntBASIC-0.92□□□□□ -2.56
HTTP42858 AC131281.1-201ENST00000522984 164 ntBASIC-0.92□□□□□ -2.56
HTTP42858 MIR4520-1-201ENST00000582609 70 ntBASIC-0.92□□□□□ -2.56
HTTP42858 AL138889.2-201ENST00000603883 242 ntBASIC-0.92□□□□□ -2.56
HTTP42858 MIR6082-201ENST00000613604 109 ntBASIC-0.92□□□□□ -2.56
HTTP42858 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.92□□□□□ -2.56
HTTP42858 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.93□□□□□ -2.56
HTTP42858 SNRPGP14-201ENST00000435400 219 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.93□□□□□ -2.56
HTTP42858 AL138752.1-201ENST00000452964 351 ntBASIC-0.93□□□□□ -2.56
HTTP42858 SNORA31.3-201ENST00000516029 96 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AL355375.2-201ENST00000574825 175 ntBASIC-0.93□□□□□ -2.56
HTTP42858 YWHAEP3-201ENST00000582767 121 ntBASIC-0.93□□□□□ -2.56
HTTP42858 MIR4438-201ENST00000585271 93 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AC004223.4-201ENST00000612426 332 ntBASIC-0.93□□□□□ -2.56
HTTP42858 U6.73-201ENST00000619194 103 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AP002371.2-201ENST00000624450 503 ntBASIC-0.93□□□□□ -2.56
HTTP42858 RNU6-403P-201ENST00000363163 104 ntBASIC-0.93□□□□□ -2.56
HTTP42858 MIR487A-201ENST00000385009 80 ntBASIC-0.93□□□□□ -2.56
HTTP42858 MT-TF-201ENST00000387314 71 ntBASIC-0.93□□□□□ -2.56
HTTP42858 MTCO3P40-201ENST00000392516 676 ntBASIC-0.93□□□□□ -2.56
HTTP42858 RNU6-588P-201ENST00000410281 105 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.93□□□□□ -2.56
HTTP42858 RNU7-55P-201ENST00000459426 62 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AC008628.2-201ENST00000502605 298 ntBASIC-0.93□□□□□ -2.56
HTTP42858 PRDX4P1-201ENST00000507189 574 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AC068587.5-201ENST00000528506 175 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.93□□□□□ -2.56
HTTP42858 AP003072.1-201ENST00000531740 145 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.93□□□□□ -2.56
HTTP42858 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.93□□□□□ -2.56
HTTP42858 AL133255.1-201ENST00000606374 441 ntBASIC-0.93□□□□□ -2.56
HTTP42858 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
HTTP42858 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.93□□□□□ -2.56
HTTP42858 RNU6-226P-201ENST00000363778 107 ntBASIC-0.93□□□□□ -2.56
HTTP42858 RNU6-740P-201ENST00000364734 105 ntBASIC-0.93□□□□□ -2.56
HTTP42858 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.93□□□□□ -2.56
HTTP42858 MIR527-201ENST00000385244 85 ntBASIC-0.93□□□□□ -2.56
HTTP42858 MTCYBP2-201ENST00000407745 171 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AC244670.1-201ENST00000436879 112 ntBASIC-0.93□□□□□ -2.56
HTTP42858 AC005592.1-201ENST00000566527 1640 ntBASIC-0.94□□□□□ -2.56
HTTP42858 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.94□□□□□ -2.56
HTTP42858 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.94□□□□□ -2.56
HTTP42858 MIR578-201ENST00000384828 96 ntBASIC-0.94□□□□□ -2.56
HTTP42858 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.94□□□□□ -2.56
HTTP42858 ZNF114P1-201ENST00000453500 292 ntBASIC-0.94□□□□□ -2.56
HTTP42858 RNU6-221P-201ENST00000459541 99 ntBASIC-0.94□□□□□ -2.56
HTTP42858 RNU6-377P-201ENST00000515965 102 ntBASIC-0.94□□□□□ -2.56
HTTP42858 AC025647.1-201ENST00000517879 253 ntBASIC-0.94□□□□□ -2.56
HTTP42858 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.94□□□□□ -2.56
HTTP42858 AC091178.2-201ENST00000584401 117 ntBASIC-0.94□□□□□ -2.56
HTTP42858 AC097478.2-201ENST00000610572 514 ntBASIC-0.94□□□□□ -2.56
HTTP42858 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.94□□□□□ -2.56
HTTP42858 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.94□□□□□ -2.56
HTTP42858 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.94□□□□□ -2.56
HTTP42858 RNU6-721P-201ENST00000410155 105 ntBASIC-0.94□□□□□ -2.56
HTTP42858 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.94□□□□□ -2.56
HTTP42858 SUMO2P5-201ENST00000506790 245 ntBASIC-0.94□□□□□ -2.56
HTTP42858 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.94□□□□□ -2.56
HTTP42858 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
HTTP42858 AC026585.1-201ENST00000619582 524 ntBASIC-0.94□□□□□ -2.56
HTTP42858 RNA5SP93-201ENST00000362525 114 ntBASIC-0.95□□□□□ -2.56
HTTP42858 RNU6-552P-201ENST00000362869 119 ntBASIC-0.95□□□□□ -2.56
HTTP42858 RNU6-873P-201ENST00000363833 107 ntBASIC-0.95□□□□□ -2.56
HTTP42858 SSR1P2-201ENST00000415208 787 ntBASIC-0.95□□□□□ -2.56
HTTP42858 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.95□□□□□ -2.56
HTTP42858 AC093899.1-201ENST00000457984 376 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms