Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU7-172P-201ENST00000517125 64 ntBASIC2.4□□□□□ -2.03
SLC6A4P31645 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC6A4P31645 AC007229.1-201ENST00000590455 412 ntBASIC2.4□□□□□ -2.03
SLC6A4P31645 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
SLC6A4P31645 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SLC6A4P31645 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
SLC6A4P31645 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SLC6A4P31645 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SLC6A4P31645 Y_RNA.7-201ENST00000362352 102 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 RNU6-1048P-201ENST00000364054 107 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 RNU1-96P-201ENST00000364163 162 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 RNU6-886P-201ENST00000384319 105 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 SNORD116-13-201ENST00000384408 92 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 RNU6-493P-201ENST00000391321 108 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 RNA5SP181-201ENST00000410246 98 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC6A4P31645 RPS15AP28-201ENST00000435088 386 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC6A4P31645 HMGB3P3-201ENST00000510526 400 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 AC107393.1-201ENST00000512403 346 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC6A4P31645 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC6A4P31645 AC127455.1-201ENST00000565496 145 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 MIR5007-201ENST00000583098 95 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.39□□□□□ -2.03
SLC6A4P31645 AL359075.3-201ENST00000613288 217 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC6A4P31645 U6.106-201ENST00000636360 105 ntBASIC2.39□□□□□ -2.03
SLC6A4P31645 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SLC6A4P31645 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SLC6A4P31645 AC134026.1-201ENST00000623249 2239 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 ZNF271P-202ENST00000465539 1970 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 RNU6-103P-201ENST00000363686 107 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 Y_RNA.172-201ENST00000363765 102 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 RNU1-91P-201ENST00000364746 163 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 U8.7-201ENST00000364940 136 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 RNU6-47P-201ENST00000383866 107 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 COX6CP10-201ENST00000416832 224 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC6A4P31645 RN7SKP164-201ENST00000516138 266 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 RNU7-99P-201ENST00000516271 62 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 AC015720.1-201ENST00000565251 277 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 MIR4308-201ENST00000580634 81 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 POLR3GP1-201ENST00000594073 261 ntBASIC2.38□□□□□ -2.03
SLC6A4P31645 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
SLC6A4P31645 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
SLC6A4P31645 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC6A4P31645 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC6A4P31645 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC6A4P31645 MIR367-201ENST00000362299 68 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 SNORD114-6-201ENST00000364393 72 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 SNORA72-201ENST00000384339 132 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 RNU1-148P-201ENST00000384472 162 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 RNU6-376P-201ENST00000384731 106 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 Y_RNA.571-201ENST00000384753 98 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 MIR626-201ENST00000385032 94 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 MIR520G-201ENST00000385064 90 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 RNU6-482P-201ENST00000391068 107 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 SNORA36B-201ENST00000410438 131 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC6A4P31645 CST2P1-201ENST00000425770 87 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 AC117454.1-201ENST00000491120 168 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 Y_RNA.662-201ENST00000516028 97 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 RNU6-1041P-201ENST00000516254 102 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 RNY3P16-201ENST00000516338 101 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 AC024995.1-201ENST00000523014 93 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 MIR4724-201ENST00000579485 89 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 MIR338-201ENST00000636369 67 ntBASIC2.37□□□□□ -2.03
SLC6A4P31645 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC6A4P31645 RNU6-23P-201ENST00000363283 107 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 Y_RNA.150-201ENST00000363562 102 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 RNU6-682P-201ENST00000363843 106 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 RNA5SP493-201ENST00000364115 91 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 Y_RNA.240-201ENST00000364469 95 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 RNU6-1062P-201ENST00000383908 107 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 RNU6-417P-201ENST00000384712 107 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 MIR562-201ENST00000384894 95 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 RNU6-381P-201ENST00000391259 108 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 RNA5SP511-201ENST00000410487 115 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 RN7SKP223-201ENST00000410582 62 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 AC007064.1-201ENST00000412238 351 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.36□□□□□ -2.03
SLC6A4P31645 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC6A4P31645 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.36□□□□□ -2.03
SLC6A4P31645 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SLC6A4P31645 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SLC6A4P31645 RNA5SP393-201ENST00000363423 117 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 RNU6-674P-201ENST00000363831 107 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 Y_RNA.238-201ENST00000364441 102 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 Y_RNA.464-201ENST00000384282 110 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 EBAG9P1-201ENST00000418955 543 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 RPL23AP54-201ENST00000495129 419 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 AC108210.2-201ENST00000503681 201 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 RNU1-142P-201ENST00000516682 145 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 RNU6-63P-201ENST00000516690 95 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 RNU6-861P-201ENST00000516745 106 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 AC015712.3-201ENST00000559380 164 ntBASIC2.35□□□□□ -2.03
SLC6A4P31645 MIR4446-201ENST00000578505 67 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms