Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC009779.6-201ENST00000603972 165 ntBASIC1.64□□□□□ -2.15
SHC1P29353 AC037487.3-201ENST00000606668 112 ntBASIC1.64□□□□□ -2.15
SHC1P29353 snoU18.1-201ENST00000629629 71 ntBASIC1.64□□□□□ -2.15
SHC1P29353 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SHC1P29353 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SHC1P29353 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
SHC1P29353 AC068700.1-201ENST00000565862 3754 ntBASIC1.63□□□□□ -2.15
SHC1P29353 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
SHC1P29353 RNU6-1235P-201ENST00000384559 107 ntBASIC1.63□□□□□ -2.15
SHC1P29353 MIR1262-201ENST00000408276 93 ntBASIC1.63□□□□□ -2.15
SHC1P29353 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.63□□□□□ -2.15
SHC1P29353 CYCSP49-201ENST00000420810 319 ntBASIC1.63□□□□□ -2.15
SHC1P29353 Y_RNA.637-201ENST00000459424 114 ntBASIC1.63□□□□□ -2.15
SHC1P29353 RNU6-498P-201ENST00000459468 107 ntBASIC1.63□□□□□ -2.15
SHC1P29353 AC114982.1-201ENST00000469402 321 ntBASIC1.63□□□□□ -2.15
SHC1P29353 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
SHC1P29353 RNU6-295P-201ENST00000516901 104 ntBASIC1.63□□□□□ -2.15
SHC1P29353 AC027419.1-201ENST00000522976 328 ntBASIC1.63□□□□□ -2.15
SHC1P29353 AC087441.2-201ENST00000529141 262 ntBASIC1.63□□□□□ -2.15
SHC1P29353 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
SHC1P29353 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
SHC1P29353 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.63□□□□□ -2.15
SHC1P29353 MIR4282-201ENST00000583613 67 ntBASIC1.63□□□□□ -2.15
SHC1P29353 AL512605.2-201ENST00000592972 256 ntBASIC1.63□□□□□ -2.15
SHC1P29353 AL162424.1-201ENST00000602325 221 ntBASIC1.63□□□□□ -2.15
SHC1P29353 AL627230.6-201ENST00000611129 280 ntBASIC1.63□□□□□ -2.15
SHC1P29353 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHC1P29353 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHC1P29353 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
SHC1P29353 RNU6-514P-201ENST00000384208 107 ntBASIC1.62□□□□□ -2.15
SHC1P29353 Y_RNA.515-201ENST00000384535 112 ntBASIC1.62□□□□□ -2.15
SHC1P29353 MIR518A2-201ENST00000384966 87 ntBASIC1.62□□□□□ -2.15
SHC1P29353 MIR676-201ENST00000390702 67 ntBASIC1.62□□□□□ -2.15
SHC1P29353 MIR764-201ENST00000390811 85 ntBASIC1.62□□□□□ -2.15
SHC1P29353 RNA5SP450-201ENST00000411206 102 ntBASIC1.62□□□□□ -2.15
SHC1P29353 AC060773.1-201ENST00000421698 310 ntBASIC1.62□□□□□ -2.15
SHC1P29353 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
SHC1P29353 AL353689.1-201ENST00000438895 199 ntBASIC1.62□□□□□ -2.15
SHC1P29353 U8.19-201ENST00000459095 133 ntBASIC1.62□□□□□ -2.15
SHC1P29353 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.62□□□□□ -2.15
SHC1P29353 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.62□□□□□ -2.15
SHC1P29353 RNU6-138P-201ENST00000515952 107 ntBASIC1.62□□□□□ -2.15
SHC1P29353 AL096840.1-201ENST00000603287 93 ntBASIC1.62□□□□□ -2.15
SHC1P29353 MIR8081-201ENST00000611533 95 ntBASIC1.62□□□□□ -2.15
SHC1P29353 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.62□□□□□ -2.15
SHC1P29353 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.62□□□□□ -2.15
SHC1P29353 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.62□□□□□ -2.15
SHC1P29353 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.62□□□□□ -2.15
SHC1P29353 AC134026.1-201ENST00000623249 2239 ntBASIC1.62□□□□□ -2.15
SHC1P29353 ZNF702P-202ENST00000434269 1966 ntBASIC1.61□□□□□ -2.15
SHC1P29353 SNORA27.1-201ENST00000362604 124 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.82-201ENST00000363000 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.92-201ENST00000363043 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 RNU6-1048P-201ENST00000364054 107 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.235-201ENST00000364412 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.274-201ENST00000364714 101 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.292-201ENST00000364904 97 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.306-201ENST00000365015 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.310-201ENST00000365063 113 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.312-201ENST00000365089 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.322-201ENST00000365151 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 RNY4P28-201ENST00000365281 93 ntBASIC1.61□□□□□ -2.15
SHC1P29353 SNORA26.5-201ENST00000391215 123 ntBASIC1.61□□□□□ -2.15
SHC1P29353 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.61□□□□□ -2.15
SHC1P29353 SNORD2.1-201ENST00000458762 69 ntBASIC1.61□□□□□ -2.15
SHC1P29353 snoU13.23-201ENST00000458863 104 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.650-201ENST00000459002 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SHC1P29353 AC010598.1-201ENST00000510378 103 ntBASIC1.61□□□□□ -2.15
SHC1P29353 RNU4-71P-201ENST00000516258 113 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.777-201ENST00000516982 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
SHC1P29353 MIR4524B-201ENST00000581569 115 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.771-201ENST00000598668 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 AL008718.3-201ENST00000610217 321 ntBASIC1.61□□□□□ -2.15
SHC1P29353 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.61□□□□□ -2.15
SHC1P29353 Y_RNA.789-201ENST00000622480 102 ntBASIC1.61□□□□□ -2.15
SHC1P29353 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SHC1P29353 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SHC1P29353 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SHC1P29353 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
SHC1P29353 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.6□□□□□ -2.15
SHC1P29353 RNU6-200P-201ENST00000364743 107 ntBASIC1.6□□□□□ -2.15
SHC1P29353 RNU6-1240P-201ENST00000365155 104 ntBASIC1.6□□□□□ -2.15
SHC1P29353 RNU6-211P-201ENST00000384047 107 ntBASIC1.6□□□□□ -2.15
SHC1P29353 RNU6-763P-201ENST00000390865 106 ntBASIC1.6□□□□□ -2.15
SHC1P29353 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.6□□□□□ -2.15
SHC1P29353 Y_RNA.590-201ENST00000410140 107 ntBASIC1.6□□□□□ -2.15
SHC1P29353 Y_RNA.626-201ENST00000411288 95 ntBASIC1.6□□□□□ -2.15
SHC1P29353 SRIP3-201ENST00000413200 219 ntBASIC1.6□□□□□ -2.15
SHC1P29353 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.6□□□□□ -2.15
SHC1P29353 AL357134.1-201ENST00000445848 426 ntBASIC1.6□□□□□ -2.15
SHC1P29353 AC074290.1-201ENST00000448883 135 ntBASIC1.6□□□□□ -2.15
SHC1P29353 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.6□□□□□ -2.15
SHC1P29353 RNY3P16-201ENST00000516338 101 ntBASIC1.6□□□□□ -2.15
SHC1P29353 RNU6-856P-201ENST00000516959 98 ntBASIC1.6□□□□□ -2.15
SHC1P29353 AC136628.3-201ENST00000521868 290 ntBASIC1.6□□□□□ -2.15
SHC1P29353 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.6□□□□□ -2.15
SHC1P29353 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.6□□□□□ -2.15
SHC1P29353 AC015712.3-201ENST00000559380 164 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms