Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-790P-201ENST00000384479 105 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 MIR514A2-201ENST00000385131 88 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 MIR514A3-201ENST00000385132 88 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 SNORD37.1-201ENST00000390968 65 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 ELOCP21-201ENST00000412558 336 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 AL590632.1-201ENST00000424289 371 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.04□□□□□ -2.42
HLA-DMBP28068 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 AC069113.3-201ENST00000521019 150 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 AL355375.2-201ENST00000574825 175 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 U6.115-201ENST00000636045 103 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 MIR371B-201ENST00000638082 66 ntBASIC-0.04□□□□□ -2.42
HLA-DMBP28068 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.05□□□□□ -2.42
HLA-DMBP28068 SNORD83.1-201ENST00000411362 77 ntBASIC-0.05□□□□□ -2.42
HLA-DMBP28068 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.05□□□□□ -2.42
HLA-DMBP28068 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.05□□□□□ -2.42
HLA-DMBP28068 SUMO1P2-201ENST00000452524 304 ntBASIC-0.05□□□□□ -2.42
HLA-DMBP28068 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.05□□□□□ -2.42
HLA-DMBP28068 RNU6-863P-201ENST00000515989 104 ntBASIC-0.05□□□□□ -2.42
HLA-DMBP28068 SNORA25.12-201ENST00000516202 82 ntBASIC-0.05□□□□□ -2.42
HLA-DMBP28068 POLR3GP2-201ENST00000588366 668 ntBASIC-0.05□□□□□ -2.42
HLA-DMBP28068 AC040904.1-201ENST00000590850 223 ntBASIC-0.05□□□□□ -2.42
HLA-DMBP28068 MIR377-201ENST00000362145 69 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 RNU6-522P-201ENST00000364497 107 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 RNU6-815P-201ENST00000384080 113 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 RNU6-136P-201ENST00000384663 107 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 MIR520F-201ENST00000384824 87 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 SNORD71-201ENST00000411292 86 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.06□□□□□ -2.42
HLA-DMBP28068 MTND1P26-201ENST00000440488 538 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.06□□□□□ -2.42
HLA-DMBP28068 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.06□□□□□ -2.42
HLA-DMBP28068 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.06□□□□□ -2.42
HLA-DMBP28068 MIR4528-201ENST00000577763 90 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 MIR4305-201ENST00000583252 102 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 AP001330.5-201ENST00000607176 411 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 AC104260.1-201ENST00000616660 539 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 AC067863.3-201ENST00000624172 122 ntBASIC-0.06□□□□□ -2.42
HLA-DMBP28068 RNU6-254P-201ENST00000363377 107 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 SNORD118-201ENST00000363593 134 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 RNU6-95P-201ENST00000384697 107 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 MIR522-201ENST00000385071 87 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 AL354751.2-201ENST00000415471 210 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 MTND1P11-201ENST00000456661 876 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 AC083798.1-201ENST00000472671 131 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 AC116353.2-201ENST00000505332 712 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 RNU7-175P-201ENST00000515915 61 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 AC099654.12-201ENST00000639868 649 ntBASIC-0.07□□□□□ -2.42
HLA-DMBP28068 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 SNORA72.3-201ENST00000365074 132 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 RNU6-396P-201ENST00000365369 105 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 MT-TN-201ENST00000387400 73 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 AL390729.2-201ENST00000416137 156 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 AC073261.1-201ENST00000429409 121 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 MTND3P16-201ENST00000452205 344 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 RNU6-261P-201ENST00000459506 102 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 AC093534.1-201ENST00000504977 132 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 ACA59.1-201ENST00000515966 143 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 RNU6-977P-201ENST00000516411 103 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 SNORD45.4-201ENST00000516629 73 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 RNU6-63P-201ENST00000516690 95 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 AC093023.1-201ENST00000547375 507 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 MIR4804-201ENST00000581683 73 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 AC022960.3-201ENST00000619794 441 ntBASIC-0.08□□□□□ -2.42
HLA-DMBP28068 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 MIR329-1-201ENST00000385028 80 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 RNU6-679P-201ENST00000391003 106 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.09□□□□□ -2.42
HLA-DMBP28068 AL139396.1-201ENST00000421137 167 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 MTND3P23-201ENST00000431980 347 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.09□□□□□ -2.42
HLA-DMBP28068 AL445567.1-201ENST00000439121 144 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.09□□□□□ -2.42
HLA-DMBP28068 HMGN2P32-201ENST00000444648 269 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 snoU13.21-201ENST00000459368 105 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.09□□□□□ -2.42
HLA-DMBP28068 RNA5SP94-201ENST00000516917 108 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.09□□□□□ -2.42
HLA-DMBP28068 AC012433.1-201ENST00000588916 398 ntBASIC-0.09□□□□□ -2.42
HLA-DMBP28068 RNA5SP214-201ENST00000363378 118 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 RNU6-934P-201ENST00000365154 107 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 MIR517A-201ENST00000385001 87 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
HLA-DMBP28068 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.1□□□□□ -2.43
HLA-DMBP28068 UQCRBP2-201ENST00000447827 297 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms