Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Y_RNA.339-201ENST00000365325 102 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.404-201ENST00000383978 102 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 RNA5SP511-201ENST00000410487 115 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 AL354751.2-201ENST00000415471 210 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 ELOCP24-201ENST00000456370 334 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 AC245047.8-201ENST00000456455 284 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 RNU7-90P-201ENST00000459216 62 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.93□□□□□ -2.26
HLA-DPA1P20036 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
HLA-DPA1P20036 AC027279.3-201ENST00000625055 122 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 MIR6767-201ENST00000637302 66 ntBASIC0.93□□□□□ -2.26
HLA-DPA1P20036 RNU6-1301P-201ENST00000362724 104 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.224-201ENST00000364308 111 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 RNU1-93P-201ENST00000364704 169 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 SNORD114-22-201ENST00000365423 72 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 SNORD116-13-201ENST00000384408 92 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 RNU6-1105P-201ENST00000384774 107 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 SNORA75.2-201ENST00000391138 150 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 SNORA75.3-201ENST00000391231 150 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DPA1P20036 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DPA1P20036 MIR2053-201ENST00000459295 91 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 RNU6-408P-201ENST00000515910 100 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 MIR2355-201ENST00000517199 87 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
HLA-DPA1P20036 AL391903.3-201ENST00000612158 163 ntBASIC0.92□□□□□ -2.26
HLA-DPA1P20036 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.88-201ENST00000363029 99 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.336-201ENST00000365307 109 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 SNORA75.4-201ENST00000391278 119 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 RNU2-64P-201ENST00000411315 191 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DPA1P20036 AC114811.1-201ENST00000507207 168 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 RNU6-197P-201ENST00000516680 100 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 MIR4452-201ENST00000583004 71 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 AC011712.1-201ENST00000588959 234 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 AC004467.1-201ENST00000615678 330 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 AL008636.1-201ENST00000625038 1018 ntBASIC0.91□□□□□ -2.26
HLA-DPA1P20036 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.6-201ENST00000362350 114 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 MIR452-201ENST00000385020 85 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 RPS3AP1-201ENST00000413190 320 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 AL162725.1-201ENST00000435405 301 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 RPEP5-201ENST00000441137 268 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DPA1P20036 AC116353.2-201ENST00000505332 712 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 AC011352.1-201ENST00000512300 793 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 SNORA70.12-201ENST00000516084 153 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 RNU6-1337P-201ENST00000516525 95 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 AC023442.1-201ENST00000531247 422 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.9□□□□□ -2.27
HLA-DPA1P20036 MIR3192-201ENST00000584920 77 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 AC093783.1-201ENST00000612976 329 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 AC007014.2-201ENST00000615581 479 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 CASC19-280ENST00000642102 1351 ntBASIC0.9□□□□□ -2.27
HLA-DPA1P20036 RNU6-99P-201ENST00000364721 107 ntBASIC0.89□□□□□ -2.27
HLA-DPA1P20036 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
HLA-DPA1P20036 RPS4XP11-201ENST00000446897 772 ntBASIC0.89□□□□□ -2.27
HLA-DPA1P20036 RPS20P10-201ENST00000451209 253 ntBASIC0.89□□□□□ -2.27
HLA-DPA1P20036 snoU13.25-201ENST00000458945 104 ntBASIC0.89□□□□□ -2.27
HLA-DPA1P20036 RNU2-12P-201ENST00000517216 168 ntBASIC0.89□□□□□ -2.27
HLA-DPA1P20036 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.89□□□□□ -2.27
HLA-DPA1P20036 AC073869.6-201ENST00000640656 341 ntBASIC0.89□□□□□ -2.27
HLA-DPA1P20036 SNORD115-30-201ENST00000364117 82 ntBASIC0.88□□□□□ -2.27
HLA-DPA1P20036 Y_RNA.361-201ENST00000365515 120 ntBASIC0.88□□□□□ -2.27
HLA-DPA1P20036 MTND1P34-201ENST00000438556 671 ntBASIC0.88□□□□□ -2.27
HLA-DPA1P20036 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DPA1P20036 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.88□□□□□ -2.27
HLA-DPA1P20036 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DPA1P20036 AC006380.1-201ENST00000603598 186 ntBASIC0.88□□□□□ -2.27
HLA-DPA1P20036 AL591926.4-201ENST00000616895 298 ntBASIC0.88□□□□□ -2.27
HLA-DPA1P20036 AC027514.1-201ENST00000588561 1603 ntBASIC0.88□□□□□ -2.27
HLA-DPA1P20036 Y_RNA.72-201ENST00000362894 103 ntBASIC0.87□□□□□ -2.27
HLA-DPA1P20036 MIR520E-201ENST00000384867 87 ntBASIC0.87□□□□□ -2.27
HLA-DPA1P20036 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DPA1P20036 MIR1298-201ENST00000408783 112 ntBASIC0.87□□□□□ -2.27
HLA-DPA1P20036 MTND4P28-201ENST00000426217 387 ntBASIC0.87□□□□□ -2.27
HLA-DPA1P20036 AC069439.1-201ENST00000494739 167 ntBASIC0.87□□□□□ -2.27
HLA-DPA1P20036 AC136628.3-201ENST00000521868 290 ntBASIC0.87□□□□□ -2.27
HLA-DPA1P20036 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
HLA-DPA1P20036 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
HLA-DPA1P20036 RNU6-961P-201ENST00000363893 105 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 SNORA69.1-201ENST00000390904 137 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
HLA-DPA1P20036 AC093019.1-201ENST00000443135 252 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.86□□□□□ -2.27
HLA-DPA1P20036 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 RNU7-30P-201ENST00000516835 62 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 AC011604.1-201ENST00000545978 196 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 AC060780.3-201ENST00000589464 80 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 AC013244.2-201ENST00000603396 103 ntBASIC0.86□□□□□ -2.27
HLA-DPA1P20036 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DPA1P20036 RNA5SP264-201ENST00000363115 107 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms