Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 RNU6-976P-201ENST00000516086 111 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 RNU7-28P-201ENST00000516759 62 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 RNU6-1096P-201ENST00000517089 102 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 AC005176.2-201ENST00000596933 147 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 AC240442.1-201ENST00000616055 283 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ERCC2P18074 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
ERCC2P18074 Y_RNA.39-201ENST00000362620 98 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 RNU6-424P-201ENST00000384367 105 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 MIR520G-201ENST00000385064 90 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 AL031003.1-201ENST00000404229 172 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 RNU2-54P-201ENST00000410299 190 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 RNU4-77P-201ENST00000516692 156 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 MIR5188-201ENST00000583467 113 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 AL117336.2-201ENST00000602435 335 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
ERCC2P18074 RNA5SP511-201ENST00000410487 115 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.35□□□□□ -2.19
ERCC2P18074 SDAD1P3-201ENST00000427380 333 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 AL049830.1-201ENST00000468034 425 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 SNORA70.12-201ENST00000516084 153 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 RNU6-1337P-201ENST00000516525 95 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 AL133255.1-201ENST00000606374 441 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
ERCC2P18074 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
ERCC2P18074 Y_RNA.80-201ENST00000362996 102 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 Y_RNA.197-201ENST00000364004 102 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 RNU1-115P-201ENST00000365329 160 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 Y_RNA.485-201ENST00000384395 102 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 RNA5SP482-201ENST00000391269 118 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 RNU6-1199P-201ENST00000411249 104 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 AL354751.2-201ENST00000415471 210 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 AL160004.2-201ENST00000432935 350 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 RPEP5-201ENST00000441137 268 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 DYNLT3P2-201ENST00000442517 295 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 RNU6-966P-201ENST00000516479 104 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 RNU6-922P-201ENST00000516753 99 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.34□□□□□ -2.19
ERCC2P18074 SNORD58B-201ENST00000607313 66 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 AL008636.1-201ENST00000625038 1018 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 AL606534.2-204ENST00000635008 178 ntBASIC1.34□□□□□ -2.19
ERCC2P18074 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 RNU6-199P-201ENST00000362954 107 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 Y_RNA.419-201ENST00000384041 102 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 Y_RNA.446-201ENST00000384178 104 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AC022028.1-201ENST00000412054 408 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AP1B1P2-201ENST00000416196 106 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 HSPE1P13-201ENST00000451143 297 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AC093850.1-201ENST00000454121 251 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 RNU7-12P-201ENST00000516030 62 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 RNU6-155P-201ENST00000516347 100 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 RNU6-165P-201ENST00000517170 99 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AL358944.1-201ENST00000528537 144 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AL513534.2-201ENST00000603836 250 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AL080274.1-201ENST00000605565 220 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AC006157.1-201ENST00000611750 366 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AL138825.1-201ENST00000618587 192 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 AC068647.2-201ENST00000637380 353 ntBASIC1.33□□□□□ -2.2
ERCC2P18074 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
ERCC2P18074 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
ERCC2P18074 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 RNU6-324P-201ENST00000363957 106 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 RNU4-41P-201ENST00000364426 143 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 RNY1P14-201ENST00000384426 108 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 MTND1P14-201ENST00000427400 950 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 AL162725.1-201ENST00000435405 301 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 Z98949.2-201ENST00000440996 144 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.32□□□□□ -2.2
ERCC2P18074 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.32□□□□□ -2.2
ERCC2P18074 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 RPS29P30-201ENST00000600975 111 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.32□□□□□ -2.2
ERCC2P18074 MIRLET7C-201ENST00000362160 84 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 Y_RNA.230-201ENST00000364348 109 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 Y_RNA.338-201ENST00000365320 114 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 SNORD116-13-201ENST00000384408 92 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 Y_RNA.509-201ENST00000384506 99 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 RPS4XP11-201ENST00000446897 772 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 AL163540.1-201ENST00000485382 386 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 AC108729.3-201ENST00000513484 108 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 RNU6-1170P-201ENST00000515974 106 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms