Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.92□□□□□ -2.1
CTPS1P17812 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.92□□□□□ -2.1
CTPS1P17812 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
CTPS1P17812 AL356292.1-201ENST00000283110 373 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 MIR335-201ENST00000362173 94 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 RNU6-117P-201ENST00000365415 107 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 AC019129.1-201ENST00000403786 261 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 RNU7-99P-201ENST00000516271 62 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 RNU6-191P-201ENST00000516295 94 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 AC110588.1-201ENST00000559699 137 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 MIR3124-201ENST00000582636 67 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.91□□□□□ -2.1
CTPS1P17812 AC073413.2-201ENST00000604332 360 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 U6.108-201ENST00000637764 58 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.91□□□□□ -2.1
CTPS1P17812 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
CTPS1P17812 Y_RNA.193-201ENST00000363979 102 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 RNU6-1019P-201ENST00000364424 107 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.9□□□□□ -2.11
CTPS1P17812 RNU6-376P-201ENST00000384731 106 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 SNORA40.18-201ENST00000391200 128 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 RNU2-38P-201ENST00000410856 79 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 RNA5SP57-201ENST00000459463 123 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 RPS26P45-201ENST00000471748 340 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 AC091959.1-201ENST00000495857 238 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 RNU6-63P-201ENST00000516690 95 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 RPL21P9-201ENST00000556149 474 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 AC004817.2-201ENST00000561794 651 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 AL512605.2-201ENST00000592972 256 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 AC092881.1-201ENST00000638218 2733 ntBASIC1.9□□□□□ -2.11
CTPS1P17812 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CTPS1P17812 Y_RNA.172-201ENST00000363765 102 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 Y_RNA.341-201ENST00000365341 102 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 Y_RNA.368-201ENST00000365547 113 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 SNORD116-13-201ENST00000384408 92 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 MIR504-201ENST00000385065 83 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 RNU11-5P-201ENST00000391216 129 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 RNA5SP212-201ENST00000391223 107 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 AC245047.4-201ENST00000433189 144 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 AL135790.2-201ENST00000437701 267 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 SNORD127-201ENST00000458892 86 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 AL163195.1-201ENST00000496941 348 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 AC084364.2-201ENST00000546924 395 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 SUB1P4-201ENST00000566062 339 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 AC022254.1-201ENST00000567857 235 ntBASIC1.89□□□□□ -2.11
CTPS1P17812 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
CTPS1P17812 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CTPS1P17812 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CTPS1P17812 Y_RNA.456-201ENST00000384232 111 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 RNA5SP100-201ENST00000410903 110 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 RNA5SP59-201ENST00000410922 110 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 AC009310.1-201ENST00000414414 451 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 AC069257.2-201ENST00000441819 155 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 RPS20P10-201ENST00000451209 253 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 RPL23AP63-201ENST00000498752 471 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CTPS1P17812 AC004832.4-201ENST00000608952 331 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 AC062037.2-201ENST00000610137 73 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 U2.14-201ENST00000615943 113 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.88□□□□□ -2.11
CTPS1P17812 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CTPS1P17812 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
CTPS1P17812 Y_RNA.14-201ENST00000362415 103 ntBASIC1.87□□□□□ -2.11
CTPS1P17812 Y_RNA.310-201ENST00000365063 113 ntBASIC1.87□□□□□ -2.11
CTPS1P17812 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
CTPS1P17812 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.87□□□□□ -2.11
CTPS1P17812 RNU6-1132P-201ENST00000459214 107 ntBASIC1.87□□□□□ -2.11
CTPS1P17812 AC012433.1-201ENST00000588916 398 ntBASIC1.87□□□□□ -2.11
CTPS1P17812 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
CTPS1P17812 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
CTPS1P17812 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.87□□□□□ -2.11
CTPS1P17812 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.87□□□□□ -2.11
CTPS1P17812 MIR7843-201ENST00000622274 79 ntBASIC1.87□□□□□ -2.11
CTPS1P17812 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CTPS1P17812 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CTPS1P17812 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
CTPS1P17812 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CTPS1P17812 AC018630.2-201ENST00000534866 2403 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 Y_RNA.44-201ENST00000362676 108 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 RNU4-13P-201ENST00000364019 141 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 RNU6-136P-201ENST00000384663 107 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 RNA5SP511-201ENST00000410487 115 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 AL162725.1-201ENST00000435405 301 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 RNU7-94P-201ENST00000459576 63 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 RPL39P38-201ENST00000467018 153 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 RPL36AP21-201ENST00000490372 323 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 SNORA27.4-201ENST00000516650 95 ntBASIC1.86□□□□□ -2.11
CTPS1P17812 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms