Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 Y_RNA.361-201ENST00000365515 120 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 RNU6-831P-201ENST00000384548 107 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 Y_RNA.557-201ENST00000384680 107 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 SNORD89-201ENST00000390981 114 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 SNORD99-201ENST00000408612 74 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 AL354751.2-201ENST00000415471 210 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 DLGAP5P1-201ENST00000430307 464 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.37□□□□□ -2.35
CTLA4P16410 MTND4LP16-201ENST00000440828 295 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 RPS20P10-201ENST00000451209 253 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 ELOCP24-201ENST00000456370 334 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 RNU6-625P-201ENST00000459412 107 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 Y_RNA.676-201ENST00000516393 96 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 RNU6-506P-201ENST00000516553 94 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 RNU6-63P-201ENST00000516690 95 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 RNU6-1223P-201ENST00000517124 104 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 AC105029.1-201ENST00000520250 669 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 AC023827.1-201ENST00000569247 97 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 MIR6128-201ENST00000615528 109 ntBASIC0.37□□□□□ -2.35
CTLA4P16410 RNU6-1090P-201ENST00000364065 94 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 RNU6-879P-201ENST00000364328 108 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 AC117470.1-201ENST00000381974 330 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 Y_RNA.402-201ENST00000383972 102 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 RNU6-1310P-201ENST00000384153 107 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 MIR520C-201ENST00000385005 87 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 MIR136-201ENST00000385207 82 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 RNU6-700P-201ENST00000391043 107 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 RNA5SP511-201ENST00000410487 115 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 RNA5SP247-201ENST00000411181 105 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 AC009161.1-201ENST00000417306 376 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.36□□□□□ -2.35
CTLA4P16410 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.36□□□□□ -2.35
CTLA4P16410 RNU6-314P-201ENST00000516574 104 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 RNU11-2P-201ENST00000516898 142 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 RNU6-273P-201ENST00000516937 96 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 MTND2P38-201ENST00000522536 667 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 AC023442.1-201ENST00000531247 422 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 AC005014.2-201ENST00000607795 599 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 AL136317.1-201ENST00000612653 226 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.36□□□□□ -2.35
CTLA4P16410 MIR3662-201ENST00000637030 95 ntBASIC0.36□□□□□ -2.35
CTLA4P16410 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CTLA4P16410 SNORA25.3-201ENST00000363205 127 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 Y_RNA.301-201ENST00000364990 103 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 RNU6-945P-201ENST00000383947 107 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 RNU6-1067P-201ENST00000384752 107 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 MIR181A1-201ENST00000385026 110 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 MIR15B-201ENST00000385045 98 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 RNA5SP118-201ENST00000410385 109 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.35□□□□□ -2.35
CTLA4P16410 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.35□□□□□ -2.35
CTLA4P16410 RNU7-87P-201ENST00000459343 62 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 SNORA40.9-201ENST00000515895 93 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 RNU7-41P-201ENST00000515917 61 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 RN7SKP164-201ENST00000516138 266 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 AC036111.3-201ENST00000526389 112 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 AL078603.1-201ENST00000603824 313 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 AF250324.2-201ENST00000608299 610 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 AL591926.4-201ENST00000616895 298 ntBASIC0.35□□□□□ -2.35
CTLA4P16410 AL442644.1-201ENST00000454390 3105 ntBASIC0.34□□□□□ -2.35
CTLA4P16410 RNU6-874P-201ENST00000362390 105 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 RNY1P16-201ENST00000363063 111 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 RNY4P14-201ENST00000363656 96 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 RNA5SP48-201ENST00000363969 126 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 RNU1-133P-201ENST00000364867 167 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 SNORD14.1-201ENST00000365609 90 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CTLA4P16410 RNU6-318P-201ENST00000384283 103 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 SNORD111-201ENST00000408139 94 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 RNU6-1148P-201ENST00000410992 104 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.34□□□□□ -2.36
CTLA4P16410 AL139396.1-201ENST00000421137 167 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 RNU7-43P-201ENST00000516554 64 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 MIR4764-201ENST00000580680 88 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 AC018462.2-201ENST00000605375 395 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 7SK.10-201ENST00000621414 298 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
CTLA4P16410 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.34□□□□□ -2.36
CTLA4P16410 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CTLA4P16410 Y_RNA.157-201ENST00000363638 102 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 RNU6-1297P-201ENST00000384415 104 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 Y_RNA.559-201ENST00000384686 107 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 MIR516B2-201ENST00000385190 85 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 RNU1-119P-201ENST00000391122 165 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CTLA4P16410 Y_RNA.621-201ENST00000411065 96 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.33□□□□□ -2.36
CTLA4P16410 AC067940.1-201ENST00000458411 300 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 U8.22-201ENST00000459141 133 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 AC026782.1-201ENST00000512952 449 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 RNU6-1337P-201ENST00000516525 95 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 AC024909.2-201ENST00000553035 286 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 AC245505.1-201ENST00000556398 224 ntBASIC0.33□□□□□ -2.36
CTLA4P16410 Y_RNA.9-201ENST00000362354 101 ntBASIC0.32□□□□□ -2.36
CTLA4P16410 Y_RNA.41-201ENST00000362646 102 ntBASIC0.32□□□□□ -2.36
CTLA4P16410 Y_RNA.226-201ENST00000364337 114 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 250.8 ms