Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU6-926P-201ENST00000384075 107 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 MT-TD-201ENST00000387419 68 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
PDGFRAP16234 SNORD78.2-201ENST00000391076 69 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 AC236972.2-201ENST00000434979 310 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 AC092473.1-201ENST00000441098 221 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 OR9P1P-201ENST00000496431 281 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 TRMT112P2-201ENST00000512910 132 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 RNA5SP168-201ENST00000516642 112 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 AC055872.1-201ENST00000570978 278 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 AC006380.1-201ENST00000603598 186 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 AC091925.1-201ENST00000623204 462 ntBASIC1.34□□□□□ -2.19
PDGFRAP16234 SNORA1B-201ENST00000362535 133 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 Y_RNA.146-201ENST00000363549 102 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 RNU4-76P-201ENST00000364509 141 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 RNU6-708P-201ENST00000384217 107 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 RNU6-424P-201ENST00000384367 105 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 RNA5SP482-201ENST00000391269 118 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 HSPE1P13-201ENST00000451143 297 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 SNORA70.12-201ENST00000516084 153 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 AL513534.2-201ENST00000603836 250 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 AC240442.1-201ENST00000616055 283 ntBASIC1.33□□□□□ -2.2
PDGFRAP16234 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
PDGFRAP16234 Y_RNA.27-201ENST00000362540 103 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 Y_RNA.101-201ENST00000363154 102 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 RNU6-505P-201ENST00000384427 107 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 Y_RNA.509-201ENST00000384506 99 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 MIR628-201ENST00000385229 95 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 Y_RNA.579-201ENST00000390939 94 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 RNU2-54P-201ENST00000410299 190 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.32□□□□□ -2.2
PDGFRAP16234 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
PDGFRAP16234 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.32□□□□□ -2.2
PDGFRAP16234 RPS29P29-201ENST00000456396 171 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 RNU6-1291P-201ENST00000516591 104 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 MIR8065-201ENST00000620577 100 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 MIR4272-201ENST00000635924 64 ntBASIC1.32□□□□□ -2.2
PDGFRAP16234 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
PDGFRAP16234 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PDGFRAP16234 Y_RNA.5-201ENST00000362334 102 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 RNU6-626P-201ENST00000363354 107 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 RNU5E-4P-201ENST00000364931 120 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 Y_RNA.428-201ENST00000384078 102 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 MIR653-201ENST00000385279 96 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 U8.16-201ENST00000391279 133 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.31□□□□□ -2.2
PDGFRAP16234 CALM2P4-201ENST00000430810 426 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 AL049830.1-201ENST00000468034 425 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 AC092991.1-201ENST00000477176 376 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.31□□□□□ -2.2
PDGFRAP16234 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 SNORD116.3-201ENST00000517176 78 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 MIR4659A-201ENST00000580269 81 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 MIR4781-201ENST00000585250 76 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 VN1R91P-201ENST00000594377 169 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 AC005176.2-201ENST00000596933 147 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 AL133255.1-201ENST00000606374 441 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 AL008636.1-201ENST00000625038 1018 ntBASIC1.31□□□□□ -2.2
PDGFRAP16234 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.31□□□□□ -2.2
PDGFRAP16234 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
PDGFRAP16234 RNU6-199P-201ENST00000362954 107 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 Y_RNA.252-201ENST00000364556 101 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 RNU6-20P-201ENST00000384106 107 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 Y_RNA.661-201ENST00000516003 99 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 RNU6-63P-201ENST00000516690 95 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 RNU6-1096P-201ENST00000517089 102 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 AC006600.1-201ENST00000572529 153 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 MIR4778-201ENST00000577635 80 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 AC011476.5-201ENST00000615594 130 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 AC106754.2-201ENST00000623006 233 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 U6.92-201ENST00000636464 89 ntBASIC1.3□□□□□ -2.2
PDGFRAP16234 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
PDGFRAP16234 AC005592.1-201ENST00000566527 1640 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PDGFRAP16234 Y_RNA.230-201ENST00000364348 109 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 RNU6-867P-201ENST00000364956 107 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 Y_RNA.419-201ENST00000384041 102 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 RNU6-136P-201ENST00000384663 107 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 AL031003.1-201ENST00000404229 172 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 RNA5SP511-201ENST00000410487 115 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.29□□□□□ -2.2
PDGFRAP16234 AL162725.1-201ENST00000435405 301 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 AC233266.1-201ENST00000454518 96 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 RNU6-976P-201ENST00000516086 111 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 Y_RNA.676-201ENST00000516393 96 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 RNU6-1337P-201ENST00000516525 95 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 RNU4-77P-201ENST00000516692 156 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 AC092447.9-201ENST00000603395 144 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 C8orf59P2-201ENST00000603441 271 ntBASIC1.29□□□□□ -2.2
PDGFRAP16234 AC242852.1-201ENST00000612151 96 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms