Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC008628.2-201ENST00000502605 298 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 RNU6-469P-201ENST00000516253 101 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AC087883.1-201ENST00000551882 391 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AL157687.1-201ENST00000554853 619 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 MIR3179-1-201ENST00000578940 84 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 MIR3179-2-201ENST00000579107 84 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 MIR3179-3-201ENST00000579566 84 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 MIR4666A-201ENST00000580160 79 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AC008608.1-201ENST00000603910 127 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AC099785.1-201ENST00000605697 437 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 uc_338.4-201ENST00000616635 176 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 MIR3179-4-201ENST00000617599 84 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 RNU6-230P-201ENST00000362457 104 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 RNU6-744P-201ENST00000365557 107 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 SNORA75B-201ENST00000384053 137 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 SNORD28-201ENST00000384706 75 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 MIR136-201ENST00000385207 82 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 MIR516B1-201ENST00000385211 90 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 MIR1185-2-201ENST00000408687 86 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AL445193.1-201ENST00000441183 141 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A3P12111 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A3P12111 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A3P12111 SNORD68-201ENST00000363214 84 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 RNU6-901P-201ENST00000384593 106 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 AC092447.3-201ENST00000426027 686 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.52□□□□□ -2.49
COL6A3P12111 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.52□□□□□ -2.49
COL6A3P12111 AC010493.1-201ENST00000513479 292 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 MTND2P38-201ENST00000522536 667 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.52□□□□□ -2.49
COL6A3P12111 MIR6507-201ENST00000613630 70 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 snoZ196.1-201ENST00000625269 89 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 SNORA24.1-201ENST00000384401 135 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 SNORD93-201ENST00000408813 74 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 MTND1P26-201ENST00000440488 538 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.52□□□□□ -2.49
COL6A3P12111 AP001189.2-201ENST00000527320 189 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 AC090517.1-201ENST00000569307 266 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 MIR548AR-201ENST00000582191 57 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 MIR4438-201ENST00000585271 93 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 Z94722.1-201ENST00000604328 474 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 AL158050.2-201ENST00000605336 568 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 RNU1-29P-201ENST00000606574 126 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.52□□□□□ -2.49
COL6A3P12111 RMST_10.1-201ENST00000616309 154 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 AL008636.1-201ENST00000625038 1018 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.52□□□□□ -2.49
COL6A3P12111 AC099654.8-201ENST00000637757 681 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 AC091304.10-201ENST00000641554 121 ntBASIC-0.52□□□□□ -2.49
COL6A3P12111 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU6-83P-201ENST00000384568 112 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU6-455P-201ENST00000384681 107 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 MIR509-1-201ENST00000385265 94 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 MIR509-2-201ENST00000390724 91 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU2-8P-201ENST00000410727 190 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AC243428.1-201ENST00000421099 264 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AL358934.1-201ENST00000432346 324 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNA5SP454-201ENST00000517231 127 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.53□□□□□ -2.49
COL6A3P12111 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.53□□□□□ -2.49
COL6A3P12111 MIR4293-201ENST00000584305 78 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 MIR6851-201ENST00000617060 67 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 U6.42-201ENST00000618440 107 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AC093726.3-201ENST00000637588 150 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 SNORA22B-201ENST00000383876 138 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.53□□□□□ -2.49
COL6A3P12111 Z98949.2-201ENST00000440996 144 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AL031274.1-201ENST00000450334 232 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 SNORA13-201ENST00000458790 133 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU6-344P-201ENST00000516635 111 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.53□□□□□ -2.49
COL6A3P12111 MIR4280-201ENST00000582178 76 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.53□□□□□ -2.49
COL6A3P12111 AC103706.2-201ENST00000638080 240 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 MTND4P9-201ENST00000507819 1346 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.53□□□□□ -2.49
COL6A3P12111 RNU7-182P-201ENST00000459009 62 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AC022137.1-201ENST00000483735 151 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.53□□□□□ -2.49
COL6A3P12111 AC025647.1-201ENST00000517879 253 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.53□□□□□ -2.49
COL6A3P12111 MIR4264-201ENST00000583520 66 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 MIR664B-201ENST00000626756 61 ntBASIC-0.53□□□□□ -2.49
COL6A3P12111 AC099786.3-201ENST00000565735 1410 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 RNU6-289P-201ENST00000364093 107 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.54□□□□□ -2.5
COL6A3P12111 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms