Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-643P-201ENST00000384018 107 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RNU6-160P-201ENST00000384591 107 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RNU6-417P-201ENST00000384712 107 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 Y_RNA.568-201ENST00000384742 113 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 MIR520G-201ENST00000385064 90 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 MIR1262-201ENST00000408276 93 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 MIR548I2-201ENST00000408348 149 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 SNRPGP8-201ENST00000454064 226 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RN7SL429P-201ENST00000479090 223 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RN7SL489P-201ENST00000486185 223 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RN7SL327P-201ENST00000488659 223 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 SNORD116-25-201ENST00000516517 92 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RNU7-128P-201ENST00000517247 62 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.69□□□□□ -1.98
COL6A2P12110 AC011604.1-201ENST00000545978 196 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 AL929325.1-201ENST00000603096 117 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RN7SL853P-201ENST00000617250 223 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 AC010297.1-201ENST00000623948 149 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL6A2P12110 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL6A2P12110 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL6A2P12110 RNA5SP393-201ENST00000363423 117 ntBASIC2.68□□□□□ -1.98
COL6A2P12110 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COL6A2P12110 AL117342.1-201ENST00000404861 406 ntBASIC2.68□□□□□ -1.98
COL6A2P12110 AL606753.1-201ENST00000427435 87 ntBASIC2.68□□□□□ -1.98
COL6A2P12110 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.68□□□□□ -1.98
COL6A2P12110 SNORA31.15-201ENST00000516771 132 ntBASIC2.68□□□□□ -1.98
COL6A2P12110 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.68□□□□□ -1.98
COL6A2P12110 AC091178.2-201ENST00000584401 117 ntBASIC2.68□□□□□ -1.98
COL6A2P12110 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.68□□□□□ -1.98
COL6A2P12110 MIR7106-201ENST00000612419 65 ntBASIC2.68□□□□□ -1.98
COL6A2P12110 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.68□□□□□ -1.98
COL6A2P12110 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.68□□□□□ -1.98
COL6A2P12110 AC100821.1-201ENST00000523153 2479 ntBASIC2.68□□□□□ -1.98
COL6A2P12110 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL6A2P12110 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL6A2P12110 RNU6-1072P-201ENST00000384703 107 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 RNU6-443P-201ENST00000384780 107 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 RNU6-131P-201ENST00000391144 107 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 RPS15AP28-201ENST00000435088 386 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 AC018634.1-201ENST00000437554 401 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 RNU7-26P-201ENST00000458980 63 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 RNU6-1041P-201ENST00000516254 102 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 AL160236.1-201ENST00000556317 195 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.67□□□□□ -1.98
COL6A2P12110 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 MIR548X2-201ENST00000579776 100 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 AL359075.3-201ENST00000613288 217 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 AL137790.1-201ENST00000634283 177 ntBASIC2.67□□□□□ -1.98
COL6A2P12110 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL6A2P12110 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
COL6A2P12110 SNORA80A-201ENST00000363922 136 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 RNU6-818P-201ENST00000364837 108 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 RNU1-138P-201ENST00000384093 164 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 Y_RNA.497-201ENST00000384447 98 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 SNORA44-201ENST00000384584 132 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 MIR515-2-201ENST00000384883 83 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 MIR515-1-201ENST00000384884 83 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 MIR524-201ENST00000385242 87 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 AC006461.1-201ENST00000412637 326 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 EEF1A1P41-201ENST00000414667 207 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 AL139132.1-201ENST00000431587 344 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 RNU6-1096P-201ENST00000517089 102 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 RNU1-104P-201ENST00000517280 175 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 CYCSP26-201ENST00000534107 320 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 MIR3646-201ENST00000578301 84 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 AC073413.2-201ENST00000604332 360 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 U6.108-201ENST00000637764 58 ntBASIC2.66□□□□□ -1.98
COL6A2P12110 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL6A2P12110 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL6A2P12110 MIR569-201ENST00000385228 96 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 Y_RNA.587-201ENST00000391210 103 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 RNA5SP467-201ENST00000391274 118 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 AL138827.1-201ENST00000402666 306 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 RNU6-1186P-201ENST00000410429 97 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 RNA5SP21-201ENST00000410917 96 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 ATP5J2P3-201ENST00000451550 258 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 AC024995.1-201ENST00000523014 93 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 AL358944.1-201ENST00000528537 144 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 AL049779.4-201ENST00000604500 156 ntBASIC2.65□□□□□ -1.99
COL6A2P12110 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.65□□□□□ -1.99
COL6A2P12110 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL6A2P12110 SNORA5B-201ENST00000363786 132 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 SNORD45.3-201ENST00000363836 72 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 Y_RNA.796-201ENST00000364268 102 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 SNORA67.1-201ENST00000364749 141 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 Y_RNA.799-201ENST00000364992 102 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 RNU6-301P-201ENST00000384277 107 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.64□□□□□ -1.99
COL6A2P12110 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 SNORD11-201ENST00000459124 84 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 RNU1-142P-201ENST00000516682 145 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 AC026271.5-201ENST00000577873 130 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 uc_338.4-201ENST00000616635 176 ntBASIC2.64□□□□□ -1.99
COL6A2P12110 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.64□□□□□ -1.99
COL6A2P12110 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL6A2P12110 AC018630.2-201ENST00000534866 2403 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms