Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU6-1054P-201ENST00000411293 104 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 AC245047.7-201ENST00000440265 293 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 Z98949.2-201ENST00000440996 144 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.653-201ENST00000459091 95 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-470P-201ENST00000515954 104 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-559P-201ENST00000516151 98 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-1337P-201ENST00000516525 95 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 SNORD68-201ENST00000363214 84 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-1080P-201ENST00000383982 107 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-163P-201ENST00000384396 106 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 RNY3P4-201ENST00000384428 101 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 MIR628-201ENST00000385229 95 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 SNORD78.2-201ENST00000391076 69 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 MIR891A-201ENST00000401237 79 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 AL031003.1-201ENST00000404229 172 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 AL162725.1-201ENST00000435405 301 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 MTCO3P10-201ENST00000455912 772 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 RPS23P4-201ENST00000487908 423 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 CYCTP-201ENST00000504253 315 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 PRDX4P1-201ENST00000507189 574 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 AC120024.3-201ENST00000603167 156 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 AC113139.1-201ENST00000605049 239 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 AC133104.2-201ENST00000615272 193 ntBASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.101-201ENST00000363154 102 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-833P-201ENST00000363486 107 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.314-201ENST00000365114 102 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.474-201ENST00000384341 102 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 RNU2-54P-201ENST00000410299 190 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 AC063976.4-201ENST00000421971 163 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 MRPS18CP6-201ENST00000423587 223 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 PIGPP3-201ENST00000425307 415 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 AC098614.3-201ENST00000438957 440 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 RPEP5-201ENST00000441137 268 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 RPS4XP11-201ENST00000446897 772 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 LINC01399-202ENST00000458450 244 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 FAM106DP-201ENST00000586416 501 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 AC005176.2-201ENST00000596933 147 ntBASIC0.79□□□□□ -2.28
IGHV3-43DP0DP04 SNORD114-27-201ENST00000363766 70 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-324P-201ENST00000363957 106 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-1297P-201ENST00000384415 104 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-1105P-201ENST00000384774 107 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 MIR526A1-201ENST00000384897 85 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 AC011476.5-201ENST00000615594 130 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 AC240442.1-201ENST00000616055 283 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 U2.1-201ENST00000618978 145 ntBASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.78□□□□□ -2.28
IGHV3-43DP0DP04 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-20P-201ENST00000384106 107 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 SNORD116-13-201ENST00000384408 92 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 SNORD12-201ENST00000391002 90 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AC114811.1-201ENST00000507207 168 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 SNORD79.1-201ENST00000516069 84 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-155P-201ENST00000516347 100 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 SNORD111.1-201ENST00000516421 86 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 SNORA20.3-201ENST00000516880 132 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AC011604.1-201ENST00000545978 196 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AL359821.1-201ENST00000605519 182 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AC103810.9-201ENST00000606688 112 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AC025253.1-201ENST00000613623 543 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AL591926.4-201ENST00000616895 298 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AC012676.2-201ENST00000619258 186 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 AC027279.3-201ENST00000625055 122 ntBASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.77□□□□□ -2.29
IGHV3-43DP0DP04 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-626P-201ENST00000363354 107 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.259-201ENST00000364619 101 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.363-201ENST00000365529 113 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 SNORA22-201ENST00000383907 134 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 Y_RNA.446-201ENST00000384178 104 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 SNORA22C-201ENST00000384614 134 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 MIR452-201ENST00000385020 85 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AC099799.1-201ENST00000439809 192 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AC092473.1-201ENST00000441098 221 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 CHEK2P4-201ENST00000450340 246 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AC108729.3-201ENST00000513484 108 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 RNU6-1012P-201ENST00000516606 109 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 MIR4659A-201ENST00000580269 81 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 HSPE1P19-201ENST00000603327 295 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AC004832.4-201ENST00000608952 331 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AL355073.2-201ENST00000612106 557 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 MTND4LP32-201ENST00000636111 270 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AC099654.14-201ENST00000638599 341 ntBASIC0.76□□□□□ -2.29
IGHV3-43DP0DP04 AL391516.1-201ENST00000554380 2449 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms