Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.22□□□□□ -2.44
TPM1P09493 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 RNU6-254P-201ENST00000363377 107 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 SNORA8.2-201ENST00000384372 139 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 RNU6-95P-201ENST00000384697 107 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 SNORD28B-201ENST00000390993 75 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 SNORD100-201ENST00000408573 76 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 USMG5P1-201ENST00000425964 177 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 USP9YP16-201ENST00000430287 407 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 AL353997.1-201ENST00000432936 108 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 USP9YP23-201ENST00000455085 407 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 MTND1P11-201ENST00000456661 876 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 RNU7-56P-201ENST00000458744 62 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 RNU6-261P-201ENST00000459506 102 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.22□□□□□ -2.44
TPM1P09493 AC022960.3-201ENST00000619794 441 ntBASIC-0.22□□□□□ -2.44
TPM1P09493 SNORD45.3-201ENST00000363836 72 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 SNORA72.3-201ENST00000365074 132 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 RNU2-54P-201ENST00000410299 190 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 MLLT10P1-201ENST00000418346 262 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.23□□□□□ -2.45
TPM1P09493 SEPT7P4-201ENST00000437076 306 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.23□□□□□ -2.45
TPM1P09493 AC116353.2-201ENST00000505332 712 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 AC010486.3-201ENST00000511602 785 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.23□□□□□ -2.45
TPM1P09493 AC090617.3-201ENST00000573670 475 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 MIR4528-201ENST00000577763 90 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 MIR4676-201ENST00000583078 72 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 AC104408.1-201ENST00000605241 170 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 AC010487.4-201ENST00000637027 61 ntBASIC-0.23□□□□□ -2.45
TPM1P09493 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 RNU6-522P-201ENST00000364497 107 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 MIR329-1-201ENST00000385028 80 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.24□□□□□ -2.45
TPM1P09493 AC015818.7-201ENST00000428754 109 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 AC087499.7-201ENST00000441958 109 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.24□□□□□ -2.45
TPM1P09493 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.24□□□□□ -2.45
TPM1P09493 AC083798.1-201ENST00000472671 131 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 AC083904.1-201ENST00000487828 231 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 AC092954.2-201ENST00000609103 430 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 AC022709.1-201ENST00000615967 87 ntBASIC-0.24□□□□□ -2.45
TPM1P09493 RNU6-222P-201ENST00000362438 107 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 RNU6-454P-201ENST00000364292 107 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 SNORA75.6-201ENST00000391318 127 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.25□□□□□ -2.45
TPM1P09493 MTATP6P13-201ENST00000438531 667 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 AC125232.2-201ENST00000592457 143 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 AP000753.3-201ENST00000604083 169 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 AP001330.5-201ENST00000607176 411 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 AL357075.2-201ENST00000614906 189 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 MIR371B-201ENST00000638082 66 ntBASIC-0.25□□□□□ -2.45
TPM1P09493 SNORD114-5-201ENST00000362928 70 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 SNORA69-201ENST00000383895 132 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 RNU6-329P-201ENST00000459618 107 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 RNU4-77P-201ENST00000516692 156 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 AC018448.1-201ENST00000552843 316 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 AC097520.1-201ENST00000624435 385 ntBASIC-0.26□□□□□ -2.45
TPM1P09493 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
TPM1P09493 SNORD50B-201ENST00000364995 70 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 RNU6-205P-201ENST00000390858 107 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.27□□□□□ -2.45
TPM1P09493 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 AC022616.4-201ENST00000522985 181 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 AC124303.1-201ENST00000605703 360 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 AC019193.3-201ENST00000609144 554 ntBASIC-0.27□□□□□ -2.45
TPM1P09493 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 RNY1P14-201ENST00000384426 108 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 RNU6-131P-201ENST00000391144 107 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 RNA5SP475-201ENST00000410568 110 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 AC092447.3-201ENST00000426027 686 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 SNORA25.10-201ENST00000515926 124 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.28□□□□□ -2.45
TPM1P09493 MTATP6P24-201ENST00000576835 677 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 AC020891.4-201ENST00000605745 93 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 MIR3674-201ENST00000636576 68 ntBASIC-0.28□□□□□ -2.45
TPM1P09493 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 RNU2-59P-201ENST00000410482 191 ntBASIC-0.29□□□□□ -2.46
TPM1P09493 EIF1P2-201ENST00000428233 350 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms