Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-1323P-201ENST00000384025 107 ntBASIC2.35□□□□□ -2.03
RHOP08100 SNORD116-13-201ENST00000384408 92 ntBASIC2.35□□□□□ -2.03
RHOP08100 SNORA8.3-201ENST00000384679 139 ntBASIC2.35□□□□□ -2.03
RHOP08100 MIR626-201ENST00000385032 94 ntBASIC2.35□□□□□ -2.03
RHOP08100 SNORA4.4-201ENST00000515921 135 ntBASIC2.35□□□□□ -2.03
RHOP08100 RN7SKP164-201ENST00000516138 266 ntBASIC2.35□□□□□ -2.03
RHOP08100 RNU7-115P-201ENST00000516433 55 ntBASIC2.35□□□□□ -2.03
RHOP08100 AC015712.3-201ENST00000559380 164 ntBASIC2.35□□□□□ -2.03
RHOP08100 DEFB122-202ENST00000569013 197 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.15-201ENST00000611544 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.16-201ENST00000613119 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.12-201ENST00000613778 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.20-201ENST00000613956 192 ntBASIC2.35□□□□□ -2.03
RHOP08100 Y_RNA.802-201ENST00000614892 130 ntBASIC2.35□□□□□ -2.03
RHOP08100 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.9-201ENST00000615427 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.11-201ENST00000616345 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.2-201ENST00000616535 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 MIR548AY-201ENST00000617669 107 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.3-201ENST00000617785 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.19-201ENST00000618602 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 RNU2-1-201ENST00000618664 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.6-201ENST00000619225 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.5-201ENST00000619465 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 U2.10-201ENST00000620268 191 ntBASIC2.35□□□□□ -2.03
RHOP08100 MIR6766-201ENST00000622641 72 ntBASIC2.35□□□□□ -2.03
RHOP08100 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.03
RHOP08100 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
RHOP08100 RNU6-1205P-201ENST00000363625 106 ntBASIC2.34□□□□□ -2.03
RHOP08100 Y_RNA.238-201ENST00000364441 102 ntBASIC2.34□□□□□ -2.03
RHOP08100 RNU1-138P-201ENST00000384093 164 ntBASIC2.34□□□□□ -2.03
RHOP08100 Y_RNA.441-201ENST00000384123 112 ntBASIC2.34□□□□□ -2.03
RHOP08100 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
RHOP08100 MIR548M-201ENST00000408260 86 ntBASIC2.34□□□□□ -2.03
RHOP08100 AL353689.1-201ENST00000438895 199 ntBASIC2.34□□□□□ -2.03
RHOP08100 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.34□□□□□ -2.03
RHOP08100 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.34□□□□□ -2.03
RHOP08100 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.34□□□□□ -2.03
RHOP08100 RNU7-116P-201ENST00000516940 62 ntBASIC2.34□□□□□ -2.03
RHOP08100 RNU6-255P-201ENST00000516957 105 ntBASIC2.34□□□□□ -2.03
RHOP08100 MRPS18CP4-201ENST00000535821 231 ntBASIC2.34□□□□□ -2.03
RHOP08100 AC127455.1-201ENST00000565496 145 ntBASIC2.34□□□□□ -2.03
RHOP08100 AL049779.4-201ENST00000604500 156 ntBASIC2.34□□□□□ -2.03
RHOP08100 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
RHOP08100 ZNF271P-202ENST00000465539 1970 ntBASIC2.34□□□□□ -2.04
RHOP08100 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
RHOP08100 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RHOP08100 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RHOP08100 AL356292.1-201ENST00000283110 373 ntBASIC2.33□□□□□ -2.04
RHOP08100 Y_RNA.75-201ENST00000362927 97 ntBASIC2.33□□□□□ -2.04
RHOP08100 RNU1-22P-201ENST00000363334 158 ntBASIC2.33□□□□□ -2.04
RHOP08100 RNU6-103P-201ENST00000363686 107 ntBASIC2.33□□□□□ -2.04
RHOP08100 U8.7-201ENST00000364940 136 ntBASIC2.33□□□□□ -2.04
RHOP08100 RNU6-746P-201ENST00000384112 109 ntBASIC2.33□□□□□ -2.04
RHOP08100 SNORA67.3-201ENST00000384366 140 ntBASIC2.33□□□□□ -2.04
RHOP08100 MIR524-201ENST00000385242 87 ntBASIC2.33□□□□□ -2.04
RHOP08100 RN7SKP51-201ENST00000410781 304 ntBASIC2.33□□□□□ -2.04
RHOP08100 AC009238.1-201ENST00000442165 424 ntBASIC2.33□□□□□ -2.04
RHOP08100 AC009237.6-201ENST00000446969 424 ntBASIC2.33□□□□□ -2.04
RHOP08100 RNU1-131P-201ENST00000458943 161 ntBASIC2.33□□□□□ -2.04
RHOP08100 AC108210.2-201ENST00000503681 201 ntBASIC2.33□□□□□ -2.04
RHOP08100 AC097462.1-201ENST00000514125 324 ntBASIC2.33□□□□□ -2.04
RHOP08100 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.33□□□□□ -2.04
RHOP08100 AL137100.2-201ENST00000555786 315 ntBASIC2.33□□□□□ -2.04
RHOP08100 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
RHOP08100 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.33□□□□□ -2.04
RHOP08100 AC005972.2-201ENST00000604690 348 ntBASIC2.33□□□□□ -2.04
RHOP08100 AL353149.1-201ENST00000610667 244 ntBASIC2.33□□□□□ -2.04
RHOP08100 AC068647.2-201ENST00000637380 353 ntBASIC2.33□□□□□ -2.04
RHOP08100 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RHOP08100 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
RHOP08100 SNORA67.1-201ENST00000364749 141 ntBASIC2.32□□□□□ -2.04
RHOP08100 Y_RNA.293-201ENST00000364908 93 ntBASIC2.32□□□□□ -2.04
RHOP08100 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
RHOP08100 AC060773.1-201ENST00000421698 310 ntBASIC2.32□□□□□ -2.04
RHOP08100 AL162725.1-201ENST00000435405 301 ntBASIC2.32□□□□□ -2.04
RHOP08100 HSPE1P21-201ENST00000438283 308 ntBASIC2.32□□□□□ -2.04
RHOP08100 RPS27P22-201ENST00000478056 241 ntBASIC2.32□□□□□ -2.04
RHOP08100 AC010409.1-201ENST00000487382 476 ntBASIC2.32□□□□□ -2.04
RHOP08100 RNU6-1278P-201ENST00000516130 107 ntBASIC2.32□□□□□ -2.04
RHOP08100 AC108706.1-201ENST00000611053 297 ntBASIC2.32□□□□□ -2.04
RHOP08100 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RHOP08100 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
RHOP08100 Y_RNA.23-201ENST00000362496 106 ntBASIC2.31□□□□□ -2.04
RHOP08100 snoU2_19.4-201ENST00000364329 80 ntBASIC2.31□□□□□ -2.04
RHOP08100 RNU6-312P-201ENST00000364629 107 ntBASIC2.31□□□□□ -2.04
RHOP08100 Y_RNA.412-201ENST00000384001 104 ntBASIC2.31□□□□□ -2.04
RHOP08100 RNU2-2P-201ENST00000410396 191 ntBASIC2.31□□□□□ -2.04
RHOP08100 RNU6-394P-201ENST00000410735 107 ntBASIC2.31□□□□□ -2.04
RHOP08100 EDDM3CP-201ENST00000415977 425 ntBASIC2.31□□□□□ -2.04
RHOP08100 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.31□□□□□ -2.04
RHOP08100 AC117454.1-201ENST00000491120 168 ntBASIC2.31□□□□□ -2.04
RHOP08100 AC005840.1-201ENST00000498412 377 ntBASIC2.31□□□□□ -2.04
RHOP08100 RNU6-1146P-201ENST00000516282 102 ntBASIC2.31□□□□□ -2.04
RHOP08100 AC027419.1-201ENST00000522976 328 ntBASIC2.31□□□□□ -2.04
RHOP08100 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
RHOP08100 AC015720.1-201ENST00000565251 277 ntBASIC2.31□□□□□ -2.04
RHOP08100 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.31□□□□□ -2.04
RHOP08100 MIR4438-201ENST00000585271 93 ntBASIC2.31□□□□□ -2.04
RHOP08100 RNU2-4P-201ENST00000606190 192 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms