Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.49□□□□□ -2.65
HMGN1P05114 MTND3P9-201ENST00000429526 346 ntBASIC-1.49□□□□□ -2.65
HMGN1P05114 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.49□□□□□ -2.65
HMGN1P05114 MTND1P35-201ENST00000526739 508 ntBASIC-1.49□□□□□ -2.65
HMGN1P05114 RNU6-85P-201ENST00000605989 107 ntBASIC-1.49□□□□□ -2.65
HMGN1P05114 AC245008.1-201ENST00000608123 476 ntBASIC-1.49□□□□□ -2.65
HMGN1P05114 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.49□□□□□ -2.65
HMGN1P05114 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 MIR487A-201ENST00000385009 80 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 SNORD83B-201ENST00000386745 93 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.5□□□□□ -2.65
HMGN1P05114 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 AL355994.1-201ENST00000424379 260 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.5□□□□□ -2.65
HMGN1P05114 PRDX4P1-201ENST00000507189 574 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 RNU6-751P-201ENST00000516382 101 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 MIR3941-201ENST00000582572 103 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 MIR3925-201ENST00000584674 77 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 AC121247.2-201ENST00000604776 136 ntBASIC-1.5□□□□□ -2.65
HMGN1P05114 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.5□□□□□ -2.65
HMGN1P05114 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.51□□□□□ -2.65
HMGN1P05114 RNU6-727P-201ENST00000363592 107 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 FCF1P9-201ENST00000412546 282 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 MCFD2P1-201ENST00000417812 300 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.51□□□□□ -2.65
HMGN1P05114 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.51□□□□□ -2.65
HMGN1P05114 AL137792.2-201ENST00000443484 235 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 AC018710.1-201ENST00000506509 158 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 MTND4LP18-201ENST00000526864 291 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 AL359999.1-201ENST00000604513 294 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 MTND1P7-201ENST00000632801 297 ntBASIC-1.51□□□□□ -2.65
HMGN1P05114 RNA5SP205-201ENST00000364653 136 ntBASIC-1.52□□□□□ -2.65
HMGN1P05114 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.52□□□□□ -2.65
HMGN1P05114 SNORD70.1-201ENST00000391007 85 ntBASIC-1.52□□□□□ -2.65
HMGN1P05114 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.52□□□□□ -2.65
HMGN1P05114 MIR3684-201ENST00000579779 74 ntBASIC-1.52□□□□□ -2.65
HMGN1P05114 AC125232.2-201ENST00000592457 143 ntBASIC-1.52□□□□□ -2.65
HMGN1P05114 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.52□□□□□ -2.65
HMGN1P05114 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.52□□□□□ -2.65
HMGN1P05114 AC127459.3-201ENST00000624328 466 ntBASIC-1.52□□□□□ -2.65
HMGN1P05114 SNORA27.1-201ENST00000362604 124 ntBASIC-1.53□□□□□ -2.65
HMGN1P05114 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.53□□□□□ -2.65
HMGN1P05114 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.53□□□□□ -2.65
HMGN1P05114 SPINT5P-201ENST00000448174 155 ntBASIC-1.53□□□□□ -2.65
HMGN1P05114 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.53□□□□□ -2.65
HMGN1P05114 AC138749.4-201ENST00000563970 127 ntBASIC-1.53□□□□□ -2.65
HMGN1P05114 AC087685.1-201ENST00000587507 141 ntBASIC-1.53□□□□□ -2.65
HMGN1P05114 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.53□□□□□ -2.65
HMGN1P05114 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 SNORD116-12-201ENST00000384468 92 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 U8.21-201ENST00000459536 136 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 AP003181.2-201ENST00000528941 181 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 AC013244.3-201ENST00000605614 388 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 AC063944.3-201ENST00000609969 533 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 AL121895.2-201ENST00000619558 447 ntBASIC-1.54□□□□□ -2.66
HMGN1P05114 RNA5SP368-201ENST00000364298 116 ntBASIC-1.55□□□□□ -2.66
HMGN1P05114 MIR450B-201ENST00000401182 78 ntBASIC-1.55□□□□□ -2.66
HMGN1P05114 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.55□□□□□ -2.66
HMGN1P05114 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.55□□□□□ -2.66
HMGN1P05114 MIR5706-201ENST00000579841 80 ntBASIC-1.55□□□□□ -2.66
HMGN1P05114 SNORD115-8-201ENST00000363856 82 ntBASIC-1.56□□□□□ -2.66
HMGN1P05114 SNORD115-38-201ENST00000365037 82 ntBASIC-1.56□□□□□ -2.66
HMGN1P05114 MTCYBP4-201ENST00000401524 249 ntBASIC-1.56□□□□□ -2.66
HMGN1P05114 SCARNA18-201ENST00000459004 134 ntBASIC-1.56□□□□□ -2.66
HMGN1P05114 SNORA27.4-201ENST00000516650 95 ntBASIC-1.56□□□□□ -2.66
HMGN1P05114 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.56□□□□□ -2.66
HMGN1P05114 MIR378D2-201ENST00000580636 98 ntBASIC-1.56□□□□□ -2.66
HMGN1P05114 BNIP3P40-201ENST00000596017 556 ntBASIC-1.56□□□□□ -2.66
HMGN1P05114 RNU6-136P-201ENST00000384663 107 ntBASIC-1.57□□□□□ -2.66
HMGN1P05114 SNORD28-201ENST00000384706 75 ntBASIC-1.57□□□□□ -2.66
HMGN1P05114 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.57□□□□□ -2.66
HMGN1P05114 RNU6-138P-201ENST00000515952 107 ntBASIC-1.57□□□□□ -2.66
HMGN1P05114 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.57□□□□□ -2.66
HMGN1P05114 AGGF1P4-201ENST00000568249 801 ntBASIC-1.57□□□□□ -2.66
HMGN1P05114 MIR4639-201ENST00000584938 69 ntBASIC-1.57□□□□□ -2.66
HMGN1P05114 RNU6-117P-201ENST00000365415 107 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 MIR518F-201ENST00000384973 87 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 MIR522-201ENST00000385071 87 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.58□□□□□ -2.66
HMGN1P05114 RNA5SP25-201ENST00000410815 110 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.58□□□□□ -2.66
HMGN1P05114 RPS27AP14-201ENST00000422868 454 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.58□□□□□ -2.66
HMGN1P05114 IGKV1-22-201ENST00000524313 326 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 MIR4677-201ENST00000584153 80 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 MIR4791-201ENST00000607666 84 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 MIR6507-201ENST00000613630 70 ntBASIC-1.58□□□□□ -2.66
HMGN1P05114 RNU6-533P-201ENST00000384144 107 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 SNORD38C-201ENST00000384381 69 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 AL008987.1-201ENST00000415528 237 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 AC091179.3-201ENST00000474761 144 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 AC091959.1-201ENST00000495857 238 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.59□□□□□ -2.66
HMGN1P05114 RNA5SP169-201ENST00000517268 117 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms