Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SNORA70.12-201ENST00000516084 153 ntBASIC0.56□□□□□ -2.32
MT-ND4P03905 AC023442.1-201ENST00000531247 422 ntBASIC0.56□□□□□ -2.32
MT-ND4P03905 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.56□□□□□ -2.32
MT-ND4P03905 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.56□□□□□ -2.32
MT-ND4P03905 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.56□□□□□ -2.32
MT-ND4P03905 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.56□□□□□ -2.32
MT-ND4P03905 AC018638.8-201ENST00000588755 281 ntBASIC0.56□□□□□ -2.32
MT-ND4P03905 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
MT-ND4P03905 AC023934.1-201ENST00000574529 2389 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 SNORD114-7-201ENST00000362520 77 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 RNU6-1301P-201ENST00000362724 104 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 RNA5SP264-201ENST00000363115 107 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 RNU1-93P-201ENST00000364704 169 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 RNU6-593P-201ENST00000364716 112 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 Y_RNA.404-201ENST00000383978 102 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 MIR1298-201ENST00000408783 112 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 SNORD12B-201ENST00000410433 91 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 RPS26P5-201ENST00000418544 335 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.55□□□□□ -2.32
MT-ND4P03905 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.55□□□□□ -2.32
MT-ND4P03905 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.55□□□□□ -2.32
MT-ND4P03905 AL035398.1-201ENST00000430869 322 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 AL162725.1-201ENST00000435405 301 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 MTND3P10-201ENST00000450967 341 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 SUMO1P2-201ENST00000452524 304 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.55□□□□□ -2.32
MT-ND4P03905 Y_RNA.708-201ENST00000516950 96 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 BNIP3P10-201ENST00000605360 577 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 AC090517.2-201ENST00000614966 680 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 AL591926.4-201ENST00000616895 298 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 U4.5-201ENST00000617137 123 ntBASIC0.55□□□□□ -2.32
MT-ND4P03905 Y_RNA.86-201ENST00000363020 111 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 SNORD115-30-201ENST00000364117 82 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 Y_RNA.330-201ENST00000365230 109 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 RNU6-1335P-201ENST00000365426 107 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 RNU6-601P-201ENST00000384540 107 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 MIR452-201ENST00000385020 85 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 Y_RNA.621-201ENST00000411065 96 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 MTATP6P26-201ENST00000445926 662 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 RPS20P10-201ENST00000451209 253 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 RNU6-1337P-201ENST00000516525 95 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 RNU2-12P-201ENST00000517216 168 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.54□□□□□ -2.32
MT-ND4P03905 AP003716.2-201ENST00000528260 108 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 AC055872.1-201ENST00000570978 278 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.54□□□□□ -2.32
MT-ND4P03905 MIR1244-1-201ENST00000612829 85 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 MIR1244-3-201ENST00000635744 85 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 MIR1244-2-201ENST00000636449 85 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 MIR1244-4-202ENST00000636813 85 ntBASIC0.54□□□□□ -2.32
MT-ND4P03905 RNU6-623P-201ENST00000363143 105 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 SNORA25.3-201ENST00000363205 127 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 U8.5-201ENST00000364528 136 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 Y_RNA.339-201ENST00000365325 102 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 MIR516B2-201ENST00000385190 85 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 RNU6-510P-201ENST00000391239 108 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 MIR548F1-201ENST00000408667 84 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 FABP5P4-201ENST00000437203 171 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 RNU6-408P-201ENST00000515910 100 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 RNU7-41P-201ENST00000515917 61 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 DEFB108E-201ENST00000524692 240 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 AC023827.1-201ENST00000569247 97 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.53□□□□□ -2.32
MT-ND4P03905 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 AC007014.2-201ENST00000615581 479 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 AC004467.1-201ENST00000615678 330 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 AC092794.2-201ENST00000620933 563 ntBASIC0.53□□□□□ -2.32
MT-ND4P03905 MIR103A2-201ENST00000362154 78 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 RNU6-961P-201ENST00000363893 105 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 RNU6-1310P-201ENST00000384153 107 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 RNU6-1105P-201ENST00000384774 107 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 MIR1185-1-201ENST00000408598 86 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 MTND3P8-201ENST00000412909 339 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.52□□□□□ -2.33
MT-ND4P03905 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.52□□□□□ -2.33
MT-ND4P03905 RNU6-718P-201ENST00000516166 105 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.52□□□□□ -2.33
MT-ND4P03905 AC131055.1-201ENST00000584626 316 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 MIR4762-201ENST00000585261 75 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 AC104465.1-201ENST00000611365 139 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 SEPT14P17-201ENST00000617978 177 ntBASIC0.52□□□□□ -2.33
MT-ND4P03905 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
MT-ND4P03905 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
MT-ND4P03905 MIR337-201ENST00000362281 93 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 Y_RNA.88-201ENST00000363029 99 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 Y_RNA.318-201ENST00000365131 97 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 Y_RNA.482-201ENST00000384377 111 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 RNU6-1297P-201ENST00000384415 104 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 AC107399.1-201ENST00000451226 265 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 RPL17P19-201ENST00000489069 552 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 SNORA25.10-201ENST00000515926 124 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 SNORA74.3-201ENST00000517108 154 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 AC109810.1-201ENST00000534066 224 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 AC011604.1-201ENST00000545978 196 ntBASIC0.51□□□□□ -2.33
MT-ND4P03905 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms