Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC022306.3-201ENST00000619930 550 ntBASIC-0.22□□□□□ -2.44
APOEP02649 RNU4-66P-201ENST00000365199 138 ntBASIC-0.23□□□□□ -2.45
APOEP02649 RNY3P10-201ENST00000384764 102 ntBASIC-0.23□□□□□ -2.45
APOEP02649 MIR625-201ENST00000385047 85 ntBASIC-0.23□□□□□ -2.45
APOEP02649 SNORD37.1-201ENST00000390968 65 ntBASIC-0.23□□□□□ -2.45
APOEP02649 MIR873-201ENST00000401120 77 ntBASIC-0.23□□□□□ -2.45
APOEP02649 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.23□□□□□ -2.45
APOEP02649 AL354751.2-201ENST00000415471 210 ntBASIC-0.23□□□□□ -2.45
APOEP02649 AL031667.1-201ENST00000440222 725 ntBASIC-0.23□□□□□ -2.45
APOEP02649 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.23□□□□□ -2.45
APOEP02649 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.23□□□□□ -2.45
APOEP02649 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.23□□□□□ -2.45
APOEP02649 AC026371.1-201ENST00000551867 419 ntBASIC-0.23□□□□□ -2.45
APOEP02649 AC072046.2-201ENST00000618366 268 ntBASIC-0.23□□□□□ -2.45
APOEP02649 AC073534.2-201ENST00000620377 381 ntBASIC-0.23□□□□□ -2.45
APOEP02649 AC079248.2-201ENST00000623779 326 ntBASIC-0.23□□□□□ -2.45
APOEP02649 U6.115-201ENST00000636045 103 ntBASIC-0.23□□□□□ -2.45
APOEP02649 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.24□□□□□ -2.45
APOEP02649 RNU6-580P-201ENST00000365159 107 ntBASIC-0.24□□□□□ -2.45
APOEP02649 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.24□□□□□ -2.45
APOEP02649 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.24□□□□□ -2.45
APOEP02649 MIR570-201ENST00000384917 97 ntBASIC-0.24□□□□□ -2.45
APOEP02649 RNU6-205P-201ENST00000390858 107 ntBASIC-0.24□□□□□ -2.45
APOEP02649 MLLT10P1-201ENST00000418346 262 ntBASIC-0.24□□□□□ -2.45
APOEP02649 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.24□□□□□ -2.45
APOEP02649 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.24□□□□□ -2.45
APOEP02649 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.24□□□□□ -2.45
APOEP02649 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.24□□□□□ -2.45
APOEP02649 MIR4676-201ENST00000583078 72 ntBASIC-0.24□□□□□ -2.45
APOEP02649 MIR4305-201ENST00000583252 102 ntBASIC-0.24□□□□□ -2.45
APOEP02649 AC020891.4-201ENST00000605745 93 ntBASIC-0.24□□□□□ -2.45
APOEP02649 AC092807.2-201ENST00000609367 243 ntBASIC-0.24□□□□□ -2.45
APOEP02649 uc_338.16-201ENST00000621804 95 ntBASIC-0.24□□□□□ -2.45
APOEP02649 AC007494.3-201ENST00000624660 743 ntBASIC-0.24□□□□□ -2.45
APOEP02649 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.24□□□□□ -2.45
APOEP02649 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.24□□□□□ -2.45
APOEP02649 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.25□□□□□ -2.45
APOEP02649 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.25□□□□□ -2.45
APOEP02649 RNU4-20P-201ENST00000365601 151 ntBASIC-0.25□□□□□ -2.45
APOEP02649 RNU2-54P-201ENST00000410299 190 ntBASIC-0.25□□□□□ -2.45
APOEP02649 ELOCP21-201ENST00000412558 336 ntBASIC-0.25□□□□□ -2.45
APOEP02649 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.25□□□□□ -2.45
APOEP02649 RNA5SP401-201ENST00000515920 127 ntBASIC-0.25□□□□□ -2.45
APOEP02649 AC134698.4-201ENST00000523451 826 ntBASIC-0.25□□□□□ -2.45
APOEP02649 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.25□□□□□ -2.45
APOEP02649 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.25□□□□□ -2.45
APOEP02649 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.26□□□□□ -2.45
APOEP02649 RNU6-281P-201ENST00000384212 103 ntBASIC-0.26□□□□□ -2.45
APOEP02649 MIR522-201ENST00000385071 87 ntBASIC-0.26□□□□□ -2.45
APOEP02649 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.26□□□□□ -2.45
APOEP02649 AL353193.1-201ENST00000421444 268 ntBASIC-0.26□□□□□ -2.45
APOEP02649 MTCO1P20-201ENST00000425366 358 ntBASIC-0.26□□□□□ -2.45
APOEP02649 AL606489.2-201ENST00000433886 234 ntBASIC-0.26□□□□□ -2.45
APOEP02649 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.26□□□□□ -2.45
APOEP02649 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.26□□□□□ -2.45
APOEP02649 MIR3915-201ENST00000578518 97 ntBASIC-0.26□□□□□ -2.45
APOEP02649 AC090517.2-201ENST00000614966 680 ntBASIC-0.26□□□□□ -2.45
APOEP02649 RNA5SP257-201ENST00000363023 116 ntBASIC-0.27□□□□□ -2.45
APOEP02649 SNORA32.1-201ENST00000364514 115 ntBASIC-0.27□□□□□ -2.45
APOEP02649 RNA5SP496-201ENST00000391240 109 ntBASIC-0.27□□□□□ -2.45
APOEP02649 SNORD100-201ENST00000408573 76 ntBASIC-0.27□□□□□ -2.45
APOEP02649 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.27□□□□□ -2.45
APOEP02649 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.27□□□□□ -2.45
APOEP02649 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.27□□□□□ -2.45
APOEP02649 RN7SKP287-201ENST00000516546 266 ntBASIC-0.27□□□□□ -2.45
APOEP02649 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.27□□□□□ -2.45
APOEP02649 MIR377-201ENST00000362145 69 ntBASIC-0.28□□□□□ -2.45
APOEP02649 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.28□□□□□ -2.45
APOEP02649 MT-TH-201ENST00000387441 69 ntBASIC-0.28□□□□□ -2.45
APOEP02649 RNU6-584P-201ENST00000410350 95 ntBASIC-0.28□□□□□ -2.45
APOEP02649 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.28□□□□□ -2.45
APOEP02649 RPL23AP54-201ENST00000495129 419 ntBASIC-0.28□□□□□ -2.45
APOEP02649 AC093023.1-201ENST00000547375 507 ntBASIC-0.28□□□□□ -2.45
APOEP02649 POLR3GP2-201ENST00000588366 668 ntBASIC-0.28□□□□□ -2.45
APOEP02649 AC005828.6-201ENST00000606610 232 ntBASIC-0.28□□□□□ -2.45
APOEP02649 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.29□□□□□ -2.46
APOEP02649 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.29□□□□□ -2.46
APOEP02649 UQCRBP2-201ENST00000447827 297 ntBASIC-0.29□□□□□ -2.46
APOEP02649 RNU6-329P-201ENST00000459618 107 ntBASIC-0.29□□□□□ -2.46
APOEP02649 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.29□□□□□ -2.46
APOEP02649 MTCO2P4-201ENST00000517968 247 ntBASIC-0.29□□□□□ -2.46
APOEP02649 AC141557.1-201ENST00000540982 400 ntBASIC-0.29□□□□□ -2.46
APOEP02649 AC008608.1-201ENST00000603910 127 ntBASIC-0.29□□□□□ -2.46
APOEP02649 AL357075.2-201ENST00000614906 189 ntBASIC-0.29□□□□□ -2.46
APOEP02649 AC098679.4-201ENST00000624241 654 ntBASIC-0.29□□□□□ -2.46
APOEP02649 SNORD50B-201ENST00000364995 70 ntBASIC-0.3□□□□□ -2.46
APOEP02649 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.3□□□□□ -2.46
APOEP02649 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
APOEP02649 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.3□□□□□ -2.46
APOEP02649 MT-TN-201ENST00000387400 73 ntBASIC-0.3□□□□□ -2.46
APOEP02649 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.3□□□□□ -2.46
APOEP02649 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.3□□□□□ -2.46
APOEP02649 MTCO2P19-201ENST00000427513 598 ntBASIC-0.3□□□□□ -2.46
APOEP02649 SNORA25.10-201ENST00000515926 124 ntBASIC-0.3□□□□□ -2.46
APOEP02649 MIR3678-201ENST00000578455 94 ntBASIC-0.3□□□□□ -2.46
APOEP02649 AC099654.12-201ENST00000639868 649 ntBASIC-0.3□□□□□ -2.46
APOEP02649 SNORA9.1-201ENST00000362412 131 ntBASIC-0.31□□□□□ -2.46
APOEP02649 RNU6-454P-201ENST00000364292 107 ntBASIC-0.31□□□□□ -2.46
APOEP02649 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.31□□□□□ -2.46
APOEP02649 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms