Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 MTND4LP26-201ENST00000518144 282 ntBASIC0.69□□□□□ -2.3
IFNB1P01574 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
IFNB1P01574 AC016727.1-205ENST00000605437 569 ntBASIC0.69□□□□□ -2.3
IFNB1P01574 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.69□□□□□ -2.3
IFNB1P01574 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.69□□□□□ -2.3
IFNB1P01574 Y_RNA.2-201ENST00000362330 96 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 MIR1298-201ENST00000408783 112 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 RNU6-1050P-201ENST00000410388 107 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 PIGPP3-201ENST00000425307 415 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 AL603825.1-201ENST00000438481 80 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.68□□□□□ -2.3
IFNB1P01574 RNU6-329P-201ENST00000459618 107 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 RNU6-307P-201ENST00000516743 106 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 Y_RNA.708-201ENST00000516950 96 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 AC131055.1-201ENST00000584626 316 ntBASIC0.68□□□□□ -2.3
IFNB1P01574 MIR136-201ENST00000385207 82 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 MIR548K-201ENST00000408406 116 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.67□□□□□ -2.3
IFNB1P01574 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.67□□□□□ -2.3
IFNB1P01574 RNU6-1053P-201ENST00000515930 101 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 Y_RNA.682-201ENST00000516457 100 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 RNU7-43P-201ENST00000516554 64 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 RNU11-2P-201ENST00000516898 142 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 RNU2-12P-201ENST00000517216 168 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 AC011604.1-201ENST00000545978 196 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 AL591926.4-201ENST00000616895 298 ntBASIC0.67□□□□□ -2.3
IFNB1P01574 SNORD115-30-201ENST00000364117 82 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 RNU4-75P-201ENST00000364621 146 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 Y_RNA.358-201ENST00000365491 99 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 RNU6-136P-201ENST00000384663 107 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 Y_RNA.554-201ENST00000384672 102 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 MIR520C-201ENST00000385005 87 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 RNA5SP511-201ENST00000410487 115 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 RPS20P10-201ENST00000451209 253 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 RNU6-1110P-201ENST00000516462 101 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 RNU6-63P-201ENST00000516690 95 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 AL136317.1-201ENST00000612653 226 ntBASIC0.66□□□□□ -2.3
IFNB1P01574 AC027514.1-201ENST00000588561 1603 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 Y_RNA.330-201ENST00000365230 109 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 RNU4-12P-201ENST00000365233 139 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 SNORD14.1-201ENST00000365609 90 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 SNORD12B-201ENST00000410433 91 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 RPL23AP50-201ENST00000434149 455 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 HMGN2P32-201ENST00000444648 269 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 Y_RNA.670-201ENST00000516255 105 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 RNU6-720P-201ENST00000516363 108 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 RNU6-1337P-201ENST00000516525 95 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 AC023442.1-201ENST00000531247 422 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 AC109810.1-201ENST00000534066 224 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.65□□□□□ -2.31
IFNB1P01574 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.65□□□□□ -2.31
IFNB1P01574 AC018638.8-201ENST00000588755 281 ntBASIC0.65□□□□□ -2.31
IFNB1P01574 RNU6-1301P-201ENST00000362724 104 ntBASIC0.64□□□□□ -2.31
IFNB1P01574 RNU6-623P-201ENST00000363143 105 ntBASIC0.64□□□□□ -2.31
IFNB1P01574 SNORD89-201ENST00000390981 114 ntBASIC0.64□□□□□ -2.31
IFNB1P01574 MIR1185-1-201ENST00000408598 86 ntBASIC0.64□□□□□ -2.31
IFNB1P01574 AL353997.1-201ENST00000432936 108 ntBASIC0.64□□□□□ -2.31
IFNB1P01574 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.64□□□□□ -2.31
IFNB1P01574 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.64□□□□□ -2.31
IFNB1P01574 AC006380.1-201ENST00000603598 186 ntBASIC0.64□□□□□ -2.31
IFNB1P01574 MIR3688-2-201ENST00000636963 87 ntBASIC0.64□□□□□ -2.31
IFNB1P01574 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
IFNB1P01574 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
IFNB1P01574 RNU1-93P-201ENST00000364704 169 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 Y_RNA.453-201ENST00000384223 109 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 Y_RNA.482-201ENST00000384377 111 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 Y_RNA.621-201ENST00000411065 96 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 MRPS18CP6-201ENST00000423587 223 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 AC092423.1-201ENST00000430165 186 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 AC116353.2-201ENST00000505332 712 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 RN7SKP164-201ENST00000516138 266 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 MIR4764-201ENST00000580680 88 ntBASIC0.63□□□□□ -2.31
IFNB1P01574 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
IFNB1P01574 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.62□□□□□ -2.31
IFNB1P01574 RPS3AP52-201ENST00000435639 297 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 AC107399.1-201ENST00000451226 265 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 AC067940.1-201ENST00000458411 300 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 RPL17P19-201ENST00000489069 552 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 AC009229.3-201ENST00000608056 282 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 AC092794.2-201ENST00000620933 563 ntBASIC0.62□□□□□ -2.31
IFNB1P01574 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
IFNB1P01574 RNU6-601P-201ENST00000384540 107 ntBASIC0.61□□□□□ -2.31
IFNB1P01574 RNU6-1067P-201ENST00000384752 107 ntBASIC0.61□□□□□ -2.31
IFNB1P01574 MIR520E-201ENST00000384867 87 ntBASIC0.61□□□□□ -2.31
IFNB1P01574 MIR522-201ENST00000385071 87 ntBASIC0.61□□□□□ -2.31
IFNB1P01574 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
IFNB1P01574 SNORD111-201ENST00000408139 94 ntBASIC0.61□□□□□ -2.31
IFNB1P01574 MIR548F5-201ENST00000408421 86 ntBASIC0.61□□□□□ -2.31
IFNB1P01574 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.61□□□□□ -2.31
IFNB1P01574 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.61□□□□□ -2.31
IFNB1P01574 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.61□□□□□ -2.31
IFNB1P01574 RNU7-41P-201ENST00000515917 61 ntBASIC0.61□□□□□ -2.31
IFNB1P01574 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms