Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 RNU6-1301P-201ENST00000362724 104 ntBASIC0.91□□□□□ -2.26
TGFAP01135 Y_RNA.124-201ENST00000363339 93 ntBASIC0.91□□□□□ -2.26
TGFAP01135 Y_RNA.363-201ENST00000365529 113 ntBASIC0.91□□□□□ -2.26
TGFAP01135 RNU6-1105P-201ENST00000384774 107 ntBASIC0.91□□□□□ -2.26
TGFAP01135 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.91□□□□□ -2.26
TGFAP01135 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.91□□□□□ -2.26
TGFAP01135 Z98949.2-201ENST00000440996 144 ntBASIC0.91□□□□□ -2.26
TGFAP01135 MTND3P10-201ENST00000450967 341 ntBASIC0.91□□□□□ -2.26
TGFAP01135 RPL7P42-201ENST00000481005 679 ntBASIC0.91□□□□□ -2.26
TGFAP01135 PDCD5P2-201ENST00000507570 312 ntBASIC0.91□□□□□ -2.26
TGFAP01135 AC011352.1-201ENST00000512300 793 ntBASIC0.91□□□□□ -2.26
TGFAP01135 RNU6-718P-201ENST00000516166 105 ntBASIC0.91□□□□□ -2.26
TGFAP01135 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.91□□□□□ -2.26
TGFAP01135 AC068790.6-201ENST00000602558 258 ntBASIC0.91□□□□□ -2.26
TGFAP01135 AC120024.3-201ENST00000603167 156 ntBASIC0.91□□□□□ -2.26
TGFAP01135 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TGFAP01135 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
TGFAP01135 MIR452-201ENST00000385020 85 ntBASIC0.9□□□□□ -2.27
TGFAP01135 SNORD12B-201ENST00000410433 91 ntBASIC0.9□□□□□ -2.27
TGFAP01135 AC114482.1-201ENST00000418010 247 ntBASIC0.9□□□□□ -2.27
TGFAP01135 AC015922.2-201ENST00000435593 184 ntBASIC0.9□□□□□ -2.27
TGFAP01135 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
TGFAP01135 ELOCP24-201ENST00000456370 334 ntBASIC0.9□□□□□ -2.27
TGFAP01135 AC245047.8-201ENST00000456455 284 ntBASIC0.9□□□□□ -2.27
TGFAP01135 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
TGFAP01135 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.9□□□□□ -2.27
TGFAP01135 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.9□□□□□ -2.27
TGFAP01135 AC011712.1-201ENST00000588959 234 ntBASIC0.9□□□□□ -2.27
TGFAP01135 AC060780.3-201ENST00000589464 80 ntBASIC0.9□□□□□ -2.27
TGFAP01135 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TGFAP01135 CASC19-280ENST00000642102 1351 ntBASIC0.89□□□□□ -2.27
TGFAP01135 Y_RNA.88-201ENST00000363029 99 ntBASIC0.89□□□□□ -2.27
TGFAP01135 RNU4-40P-201ENST00000364351 143 ntBASIC0.89□□□□□ -2.27
TGFAP01135 Y_RNA.336-201ENST00000365307 109 ntBASIC0.89□□□□□ -2.27
TGFAP01135 RNU6-163P-201ENST00000384396 106 ntBASIC0.89□□□□□ -2.27
TGFAP01135 MIR7-2-201ENST00000384970 110 ntBASIC0.89□□□□□ -2.27
TGFAP01135 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.89□□□□□ -2.27
TGFAP01135 RPL23AP50-201ENST00000434149 455 ntBASIC0.89□□□□□ -2.27
TGFAP01135 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.89□□□□□ -2.27
TGFAP01135 RNU7-90P-201ENST00000459216 62 ntBASIC0.89□□□□□ -2.27
TGFAP01135 RNU7-21P-201ENST00000459430 62 ntBASIC0.89□□□□□ -2.27
TGFAP01135 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
TGFAP01135 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.89□□□□□ -2.27
TGFAP01135 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.89□□□□□ -2.27
TGFAP01135 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.89□□□□□ -2.27
TGFAP01135 PRELID3BP2-201ENST00000605362 201 ntBASIC0.89□□□□□ -2.27
TGFAP01135 AL391903.3-201ENST00000612158 163 ntBASIC0.89□□□□□ -2.27
TGFAP01135 AC007014.2-201ENST00000615581 479 ntBASIC0.89□□□□□ -2.27
TGFAP01135 AC008163.1-202ENST00000636004 2889 ntBASIC0.88□□□□□ -2.27
TGFAP01135 U8.5-201ENST00000364528 136 ntBASIC0.88□□□□□ -2.27
TGFAP01135 RNU6-969P-201ENST00000383900 105 ntBASIC0.88□□□□□ -2.27
TGFAP01135 MIR526A1-201ENST00000384897 85 ntBASIC0.88□□□□□ -2.27
TGFAP01135 SNORA75.4-201ENST00000391278 119 ntBASIC0.88□□□□□ -2.27
TGFAP01135 RNU2-64P-201ENST00000411315 191 ntBASIC0.88□□□□□ -2.27
TGFAP01135 AL162725.1-201ENST00000435405 301 ntBASIC0.88□□□□□ -2.27
TGFAP01135 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.88□□□□□ -2.27
TGFAP01135 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.88□□□□□ -2.27
TGFAP01135 RPS29P29-201ENST00000456396 171 ntBASIC0.88□□□□□ -2.27
TGFAP01135 MIR2053-201ENST00000459295 91 ntBASIC0.88□□□□□ -2.27
TGFAP01135 RPS26P48-201ENST00000491713 339 ntBASIC0.88□□□□□ -2.27
TGFAP01135 RNU6-358P-201ENST00000516564 75 ntBASIC0.88□□□□□ -2.27
TGFAP01135 RNA5SP480-201ENST00000516840 109 ntBASIC0.88□□□□□ -2.27
TGFAP01135 RNU2-12P-201ENST00000517216 168 ntBASIC0.88□□□□□ -2.27
TGFAP01135 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.88□□□□□ -2.27
TGFAP01135 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.88□□□□□ -2.27
TGFAP01135 AC211469.2-201ENST00000605461 205 ntBASIC0.88□□□□□ -2.27
TGFAP01135 AC093783.1-201ENST00000612976 329 ntBASIC0.88□□□□□ -2.27
TGFAP01135 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
TGFAP01135 SNORD115-30-201ENST00000364117 82 ntBASIC0.87□□□□□ -2.27
TGFAP01135 Y_RNA.354-201ENST00000365448 111 ntBASIC0.87□□□□□ -2.27
TGFAP01135 Y_RNA.404-201ENST00000383978 102 ntBASIC0.87□□□□□ -2.27
TGFAP01135 SNORD116-13-201ENST00000384408 92 ntBASIC0.87□□□□□ -2.27
TGFAP01135 MIR598-201ENST00000384868 97 ntBASIC0.87□□□□□ -2.27
TGFAP01135 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.87□□□□□ -2.27
TGFAP01135 AL354751.2-201ENST00000415471 210 ntBASIC0.87□□□□□ -2.27
TGFAP01135 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.87□□□□□ -2.27
TGFAP01135 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.87□□□□□ -2.27
TGFAP01135 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
TGFAP01135 AC006380.1-201ENST00000603598 186 ntBASIC0.87□□□□□ -2.27
TGFAP01135 AL096861.1-201ENST00000610899 123 ntBASIC0.87□□□□□ -2.27
TGFAP01135 AC073869.6-201ENST00000640656 341 ntBASIC0.87□□□□□ -2.27
TGFAP01135 Y_RNA.577-201ENST00000384794 101 ntBASIC0.86□□□□□ -2.27
TGFAP01135 MIR625-201ENST00000385047 85 ntBASIC0.86□□□□□ -2.27
TGFAP01135 MIR942-201ENST00000401111 86 ntBASIC0.86□□□□□ -2.27
TGFAP01135 MTND4P28-201ENST00000426217 387 ntBASIC0.86□□□□□ -2.27
TGFAP01135 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.86□□□□□ -2.27
TGFAP01135 AC093019.1-201ENST00000443135 252 ntBASIC0.86□□□□□ -2.27
TGFAP01135 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.86□□□□□ -2.27
TGFAP01135 Y_RNA.655-201ENST00000515919 96 ntBASIC0.86□□□□□ -2.27
TGFAP01135 RNU6-63P-201ENST00000516690 95 ntBASIC0.86□□□□□ -2.27
TGFAP01135 AC090142.3-201ENST00000519012 385 ntBASIC0.86□□□□□ -2.27
TGFAP01135 AC022616.4-201ENST00000522985 181 ntBASIC0.86□□□□□ -2.27
TGFAP01135 MIR4762-201ENST00000585261 75 ntBASIC0.86□□□□□ -2.27
TGFAP01135 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.86□□□□□ -2.27
TGFAP01135 SNORD114-21-201ENST00000606412 72 ntBASIC0.86□□□□□ -2.27
TGFAP01135 MIR1244-1-201ENST00000612829 85 ntBASIC0.86□□□□□ -2.27
TGFAP01135 MIR1244-3-201ENST00000635744 85 ntBASIC0.86□□□□□ -2.27
TGFAP01135 MIR1244-2-201ENST00000636449 85 ntBASIC0.86□□□□□ -2.27
TGFAP01135 MIR1244-4-202ENST00000636813 85 ntBASIC0.86□□□□□ -2.27
TGFAP01135 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms