Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU7-4P-201ENST00000516961 62 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU7-172P-201ENST00000517125 64 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU2-12P-201ENST00000517216 168 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.97□□□□□ -2.25
CTDNEP1O95476 AC091178.2-201ENST00000584401 117 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 AC004467.1-201ENST00000615678 330 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 U2.1-201ENST00000618978 145 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 Y_RNA.5-201ENST00000362334 102 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 Y_RNA.187-201ENST00000363918 113 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 SNORD115-30-201ENST00000364117 82 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 Y_RNA.315-201ENST00000365117 102 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 RNU6-1065P-201ENST00000384513 106 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 RNA5SP475-201ENST00000410568 110 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 MTCO3P19-201ENST00000415864 321 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.96□□□□□ -2.26
CTDNEP1O95476 RNA5SP102-201ENST00000516865 106 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 SUMO2P16-201ENST00000519475 264 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 AL365434.2-201ENST00000607979 234 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 MIR6079-201ENST00000635807 62 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 MIR4272-201ENST00000635924 64 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 U6.92-201ENST00000636464 89 ntBASIC0.96□□□□□ -2.26
CTDNEP1O95476 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
CTDNEP1O95476 RNA5SP327-201ENST00000362494 101 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 RNU4-73P-201ENST00000363164 141 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 Y_RNA.172-201ENST00000363765 102 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 RNU1-93P-201ENST00000364704 169 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 MIR873-201ENST00000401120 77 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 Y_RNA.605-201ENST00000410577 105 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 RNU4-77P-201ENST00000516692 156 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 AC144568.1-201ENST00000520139 137 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 MIR4795-201ENST00000584182 89 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 LARP7P1-201ENST00000605576 316 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 SNORD58B-201ENST00000607313 66 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 AL021879.1-201ENST00000611756 288 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 Y_RNA.804-201ENST00000615262 101 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 AC240442.1-201ENST00000616055 283 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 MIR8070-201ENST00000616510 88 ntBASIC0.95□□□□□ -2.26
CTDNEP1O95476 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CTDNEP1O95476 SNORA1B-201ENST00000362535 133 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 RNU4-79P-201ENST00000362764 141 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 Y_RNA.80-201ENST00000362996 102 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 RNU6-20P-201ENST00000384106 107 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 Y_RNA.485-201ENST00000384395 102 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 RNU6-136P-201ENST00000384663 107 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 Y_RNA.579-201ENST00000390939 94 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 RNU5A-5P-201ENST00000411054 116 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 AC099799.1-201ENST00000439809 192 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
CTDNEP1O95476 MTND3P22-201ENST00000510932 243 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 Y_RNA.661-201ENST00000516003 99 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 RNU6-1291P-201ENST00000516591 104 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.94□□□□□ -2.26
CTDNEP1O95476 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.94□□□□□ -2.26
CTDNEP1O95476 AC011604.1-201ENST00000545978 196 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 AC006600.1-201ENST00000572529 153 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 MIR4659A-201ENST00000580269 81 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 AL117336.2-201ENST00000602435 335 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 AC133104.2-201ENST00000615272 193 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.94□□□□□ -2.26
CTDNEP1O95476 AC068700.1-201ENST00000565862 3754 ntBASIC0.94□□□□□ -2.26
CTDNEP1O95476 RNU6-1123P-201ENST00000362347 106 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 RNU6-626P-201ENST00000363354 107 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 SNORD78.2-201ENST00000391076 69 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 RN7SKP200-201ENST00000410564 320 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 MTCO2P27-201ENST00000420740 428 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 CALM2P4-201ENST00000430810 426 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 RPEP5-201ENST00000441137 268 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.93□□□□□ -2.26
CTDNEP1O95476 STAG3L5P-204ENST00000443759 179 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 PGBD4P5-201ENST00000445958 426 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 FCF1P4-201ENST00000448326 183 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 OR9P1P-201ENST00000496431 281 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 AL133373.1-201ENST00000497098 94 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 RNU6-911P-201ENST00000516523 104 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 RNU6-113P-201ENST00000516653 101 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 CYP3A52P-201ENST00000563326 91 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 MIR3684-201ENST00000579779 74 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 MIR8065-201ENST00000620577 100 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 AC127459.3-201ENST00000624328 466 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
CTDNEP1O95476 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.93□□□□□ -2.26
CTDNEP1O95476 AC005592.1-201ENST00000566527 1640 ntBASIC0.93□□□□□ -2.26
CTDNEP1O95476 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CTDNEP1O95476 Y_RNA.27-201ENST00000362540 103 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 Y_RNA.146-201ENST00000363549 102 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 Y_RNA.252-201ENST00000364556 101 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 Y_RNA.267-201ENST00000364679 109 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 SNORA25.9-201ENST00000365087 128 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 RNA5SP259-201ENST00000365541 109 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 SNORD116-13-201ENST00000384408 92 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 U8.16-201ENST00000391279 133 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 AL031003.1-201ENST00000404229 172 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 RNU2-54P-201ENST00000410299 190 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 RNA5SP511-201ENST00000410487 115 ntBASIC0.92□□□□□ -2.26
CTDNEP1O95476 AC092991.1-201ENST00000477176 376 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms