Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC010424.1-201ENST00000506336 297 ntBASIC0.34□□□□□ -2.36
SNX4O95219 RNU4-57P-201ENST00000515980 135 ntBASIC0.34□□□□□ -2.36
SNX4O95219 Y_RNA.717-201ENST00000517106 92 ntBASIC0.34□□□□□ -2.36
SNX4O95219 AC093027.1-201ENST00000546698 429 ntBASIC0.34□□□□□ -2.36
SNX4O95219 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.36
SNX4O95219 AC104260.1-201ENST00000616660 539 ntBASIC0.34□□□□□ -2.36
SNX4O95219 AL359880.1-201ENST00000621879 266 ntBASIC0.34□□□□□ -2.36
SNX4O95219 MIR1-1-201ENST00000362147 71 ntBASIC0.33□□□□□ -2.36
SNX4O95219 Y_RNA.106-201ENST00000363189 100 ntBASIC0.33□□□□□ -2.36
SNX4O95219 Y_RNA.359-201ENST00000365498 102 ntBASIC0.33□□□□□ -2.36
SNX4O95219 MIR329-1-201ENST00000385028 80 ntBASIC0.33□□□□□ -2.36
SNX4O95219 MIR516B2-201ENST00000385190 85 ntBASIC0.33□□□□□ -2.36
SNX4O95219 MIR140-201ENST00000385282 100 ntBASIC0.33□□□□□ -2.36
SNX4O95219 RNA5SP475-201ENST00000410568 110 ntBASIC0.33□□□□□ -2.36
SNX4O95219 Y_RNA.621-201ENST00000411065 96 ntBASIC0.33□□□□□ -2.36
SNX4O95219 ELOCP24-201ENST00000456370 334 ntBASIC0.33□□□□□ -2.36
SNX4O95219 AC006362.1-201ENST00000567392 174 ntBASIC0.33□□□□□ -2.36
SNX4O95219 RN7SL793P-201ENST00000583259 296 ntBASIC0.33□□□□□ -2.36
SNX4O95219 MIR3672-201ENST00000584290 82 ntBASIC0.33□□□□□ -2.36
SNX4O95219 AC011712.1-201ENST00000588959 234 ntBASIC0.33□□□□□ -2.36
SNX4O95219 AC124864.2-201ENST00000624736 186 ntBASIC0.33□□□□□ -2.36
SNX4O95219 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
SNX4O95219 MTND5P26-201ENST00000426018 1752 ntBASIC0.32□□□□□ -2.36
SNX4O95219 RNU6-222P-201ENST00000362438 107 ntBASIC0.32□□□□□ -2.36
SNX4O95219 Y_RNA.77-201ENST00000362962 107 ntBASIC0.32□□□□□ -2.36
SNX4O95219 Y_RNA.212-201ENST00000364177 102 ntBASIC0.32□□□□□ -2.36
SNX4O95219 SNORD116-11-201ENST00000383882 92 ntBASIC0.32□□□□□ -2.36
SNX4O95219 RNU6-1145P-201ENST00000384246 107 ntBASIC0.32□□□□□ -2.36
SNX4O95219 MTND1P4-201ENST00000435196 415 ntBASIC0.32□□□□□ -2.36
SNX4O95219 UBE2V1P7-201ENST00000446395 340 ntBASIC0.32□□□□□ -2.36
SNX4O95219 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.32□□□□□ -2.36
SNX4O95219 AC018448.1-201ENST00000552843 316 ntBASIC0.32□□□□□ -2.36
SNX4O95219 NBR2-204ENST00000587322 63 ntBASIC0.32□□□□□ -2.36
SNX4O95219 AC104695.3-201ENST00000604052 296 ntBASIC0.32□□□□□ -2.36
SNX4O95219 RNU6-177P-201ENST00000411257 104 ntBASIC0.31□□□□□ -2.36
SNX4O95219 AL354751.2-201ENST00000415471 210 ntBASIC0.31□□□□□ -2.36
SNX4O95219 MTND2P9-201ENST00000422293 931 ntBASIC0.31□□□□□ -2.36
SNX4O95219 EIF1P2-201ENST00000428233 350 ntBASIC0.31□□□□□ -2.36
SNX4O95219 RNU7-66P-201ENST00000459469 62 ntBASIC0.31□□□□□ -2.36
SNX4O95219 RNU6-1281P-201ENST00000516223 105 ntBASIC0.31□□□□□ -2.36
SNX4O95219 SNORA18.7-201ENST00000516910 131 ntBASIC0.31□□□□□ -2.36
SNX4O95219 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.31□□□□□ -2.36
SNX4O95219 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.31□□□□□ -2.36
SNX4O95219 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.31□□□□□ -2.36
SNX4O95219 AC125232.2-201ENST00000592457 143 ntBASIC0.31□□□□□ -2.36
SNX4O95219 AL591926.4-201ENST00000616895 298 ntBASIC0.31□□□□□ -2.36
SNX4O95219 AC090582.1-201ENST00000636321 199 ntBASIC0.31□□□□□ -2.36
SNX4O95219 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
SNX4O95219 AC100810.6-201ENST00000638068 285 ntBASIC0.31□□□□□ -2.36
SNX4O95219 Y_RNA.414-201ENST00000384011 101 ntBASIC0.3□□□□□ -2.36
SNX4O95219 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
SNX4O95219 AF250324.2-201ENST00000608299 610 ntBASIC0.3□□□□□ -2.36
SNX4O95219 MIR3674-201ENST00000636576 68 ntBASIC0.3□□□□□ -2.36
SNX4O95219 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SNX4O95219 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
SNX4O95219 RNU4-45P-201ENST00000365469 141 ntBASIC0.29□□□□□ -2.36
SNX4O95219 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SNX4O95219 RNU6-1304P-201ENST00000411374 106 ntBASIC0.29□□□□□ -2.36
SNX4O95219 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.29□□□□□ -2.36
SNX4O95219 AC005534.2-201ENST00000431047 433 ntBASIC0.29□□□□□ -2.36
SNX4O95219 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
SNX4O95219 HMGN2P32-201ENST00000444648 269 ntBASIC0.29□□□□□ -2.36
SNX4O95219 AL392103.1-201ENST00000447000 198 ntBASIC0.29□□□□□ -2.36
SNX4O95219 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
SNX4O95219 AC078883.4-201ENST00000623218 367 ntBASIC0.29□□□□□ -2.36
SNX4O95219 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.28□□□□□ -2.36
SNX4O95219 Y_RNA.243-201ENST00000364481 109 ntBASIC0.28□□□□□ -2.36
SNX4O95219 RNY1P8-201ENST00000383970 114 ntBASIC0.28□□□□□ -2.36
SNX4O95219 RNU6-1310P-201ENST00000384153 107 ntBASIC0.28□□□□□ -2.36
SNX4O95219 SNORA2B-201ENST00000384583 137 ntBASIC0.28□□□□□ -2.36
SNX4O95219 RNU6-306P-201ENST00000384617 107 ntBASIC0.28□□□□□ -2.36
SNX4O95219 DEFB108C-201ENST00000400154 252 ntBASIC0.28□□□□□ -2.36
SNX4O95219 RNU6-625P-201ENST00000459412 107 ntBASIC0.28□□□□□ -2.36
SNX4O95219 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.28□□□□□ -2.36
SNX4O95219 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.28□□□□□ -2.36
SNX4O95219 RNU6-63P-201ENST00000516690 95 ntBASIC0.28□□□□□ -2.36
SNX4O95219 MTND2P38-201ENST00000522536 667 ntBASIC0.28□□□□□ -2.36
SNX4O95219 AC022616.4-201ENST00000522985 181 ntBASIC0.28□□□□□ -2.36
SNX4O95219 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.28□□□□□ -2.36
SNX4O95219 RNU6-1084P-201ENST00000362498 107 ntBASIC0.27□□□□□ -2.37
SNX4O95219 Y_RNA.36-201ENST00000362602 112 ntBASIC0.27□□□□□ -2.37
SNX4O95219 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
SNX4O95219 Y_RNA.370-201ENST00000365589 108 ntBASIC0.27□□□□□ -2.37
SNX4O95219 RNU6-259P-201ENST00000383999 107 ntBASIC0.27□□□□□ -2.37
SNX4O95219 RNY1P4-201ENST00000384595 115 ntBASIC0.27□□□□□ -2.37
SNX4O95219 RNA5SP511-201ENST00000410487 115 ntBASIC0.27□□□□□ -2.37
SNX4O95219 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.27□□□□□ -2.37
SNX4O95219 U8.19-201ENST00000459095 133 ntBASIC0.27□□□□□ -2.37
SNX4O95219 U8.22-201ENST00000459141 133 ntBASIC0.27□□□□□ -2.37
SNX4O95219 SNORD123-201ENST00000459473 70 ntBASIC0.27□□□□□ -2.37
SNX4O95219 AL355073.2-201ENST00000612106 557 ntBASIC0.27□□□□□ -2.37
SNX4O95219 AL357075.2-201ENST00000614906 189 ntBASIC0.27□□□□□ -2.37
SNX4O95219 AC008133.2-201ENST00000624540 351 ntBASIC0.27□□□□□ -2.37
SNX4O95219 Y_RNA.256-201ENST00000364594 104 ntBASIC0.26□□□□□ -2.37
SNX4O95219 Y_RNA.364-201ENST00000365532 101 ntBASIC0.26□□□□□ -2.37
SNX4O95219 RNU6-1119P-201ENST00000384349 108 ntBASIC0.26□□□□□ -2.37
SNX4O95219 SNORD116-8-201ENST00000384365 95 ntBASIC0.26□□□□□ -2.37
SNX4O95219 Y_RNA.540-201ENST00000384638 111 ntBASIC0.26□□□□□ -2.37
SNX4O95219 MIR190B-201ENST00000401119 79 ntBASIC0.26□□□□□ -2.37
SNX4O95219 RNU6-613P-201ENST00000410412 108 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms