Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RN7SKP19-201ENST00000516016 252 ntBASIC3.65□□□□□ -1.83
PTCD1O75127 RNU6-991P-201ENST00000516168 107 ntBASIC3.65□□□□□ -1.83
PTCD1O75127 RNU2-34P-201ENST00000516534 121 ntBASIC3.65□□□□□ -1.83
PTCD1O75127 MIR4435-1-201ENST00000582552 80 ntBASIC3.65□□□□□ -1.83
PTCD1O75127 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTCD1O75127 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTCD1O75127 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCD1O75127 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCD1O75127 AL021368.2-201ENST00000606125 5352 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCD1O75127 SNORD21-201ENST00000383953 95 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 RNU6-484P-201ENST00000384016 107 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 RNY3P5-201ENST00000384127 102 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 Y_RNA.587-201ENST00000391210 103 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 AL138827.1-201ENST00000402666 306 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCD1O75127 RN7SL633P-201ENST00000488974 297 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCD1O75127 AC015720.1-201ENST00000565251 277 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 AC062037.1-201ENST00000605302 128 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 AC090115.4-201ENST00000609970 188 ntBASIC3.64□□□□□ -1.83
PTCD1O75127 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
PTCD1O75127 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PTCD1O75127 MIR1183-201ENST00000408856 89 ntBASIC3.63□□□□□ -1.83
PTCD1O75127 RNU2-63P-201ENST00000410792 194 ntBASIC3.63□□□□□ -1.83
PTCD1O75127 SNORA4.4-201ENST00000515921 135 ntBASIC3.63□□□□□ -1.83
PTCD1O75127 Y_RNA.690-201ENST00000516603 95 ntBASIC3.63□□□□□ -1.83
PTCD1O75127 AC091544.4-201ENST00000555268 342 ntBASIC3.63□□□□□ -1.83
PTCD1O75127 MIR4438-201ENST00000585271 93 ntBASIC3.63□□□□□ -1.83
PTCD1O75127 AC110741.2-201ENST00000605278 268 ntBASIC3.63□□□□□ -1.83
PTCD1O75127 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
PTCD1O75127 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.62□□□□□ -1.83
PTCD1O75127 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PTCD1O75127 MIR1253-201ENST00000408273 105 ntBASIC3.62□□□□□ -1.83
PTCD1O75127 RNU6-197P-201ENST00000516680 100 ntBASIC3.62□□□□□ -1.83
PTCD1O75127 AL355297.2-201ENST00000604792 129 ntBASIC3.62□□□□□ -1.83
PTCD1O75127 AC025166.1-201ENST00000612411 163 ntBASIC3.62□□□□□ -1.83
PTCD1O75127 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PTCD1O75127 MTND5P18-201ENST00000445624 1801 ntBASIC3.62□□□□□ -1.83
PTCD1O75127 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCD1O75127 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.61□□□□□ -1.83
PTCD1O75127 RNA5SP173-201ENST00000364857 136 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 RNU6-117P-201ENST00000365415 107 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 MIR488-201ENST00000365739 83 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 SNORA79-201ENST00000408376 140 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 RNA5SP508-201ENST00000411327 119 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 MIR4644-201ENST00000579929 84 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 AC131055.1-201ENST00000584626 316 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 AP001318.4-201ENST00000616637 121 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 MIR1245B-201ENST00000636115 69 ntBASIC3.61□□□□□ -1.83
PTCD1O75127 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCD1O75127 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCD1O75127 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCD1O75127 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PTCD1O75127 RNU6-859P-201ENST00000362728 107 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 RNA5SP383-201ENST00000362934 120 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 RNU6-674P-201ENST00000363831 107 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 Y_RNA.328-201ENST00000365208 113 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 SNORD72-201ENST00000390994 80 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 RNA5SP496-201ENST00000391240 109 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 AL603914.1-201ENST00000401964 204 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 RPS29P21-201ENST00000496272 170 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 AC093259.1-201ENST00000509755 300 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 RNU6-638P-201ENST00000516582 104 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 RNU7-172P-201ENST00000517125 64 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 AP003327.1-201ENST00000529684 127 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 AL049861.1-201ENST00000603130 150 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 AL021707.8-201ENST00000609428 183 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 MIR6715A-201ENST00000615929 79 ntBASIC3.6□□□□□ -1.83
PTCD1O75127 Y_RNA.91-201ENST00000363042 107 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 RNU1-22P-201ENST00000363334 158 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 RNU6-647P-201ENST00000364243 107 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 RNU6-1107P-201ENST00000364817 104 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 DYNLT3P1-201ENST00000378574 347 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 Y_RNA.549-201ENST00000384657 102 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 SNORA46-201ENST00000384762 135 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 MIR95-201ENST00000385072 81 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 MIR1261-201ENST00000408659 82 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 RN7SKP101-201ENST00000411376 320 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 AC123900.1-201ENST00000420390 96 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 TRBV12-1-201ENST00000479785 344 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 AC097462.1-201ENST00000514125 324 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 SNORA48.11-201ENST00000517015 89 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 MIR3117-201ENST00000584034 78 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 AL929325.1-201ENST00000603096 117 ntBASIC3.59□□□□□ -1.83
PTCD1O75127 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.59□□□□□ -1.83
PTCD1O75127 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PTCD1O75127 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PTCD1O75127 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCD1O75127 RNU6-573P-201ENST00000383938 106 ntBASIC3.58□□□□□ -1.84
PTCD1O75127 RNU6-1080P-201ENST00000383982 107 ntBASIC3.58□□□□□ -1.84
PTCD1O75127 MIR9-1-201ENST00000385198 89 ntBASIC3.58□□□□□ -1.84
PTCD1O75127 RNU6-592P-201ENST00000411333 103 ntBASIC3.58□□□□□ -1.84
PTCD1O75127 AL356280.1-201ENST00000603614 379 ntBASIC3.58□□□□□ -1.84
PTCD1O75127 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.58□□□□□ -1.84
PTCD1O75127 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCD1O75127 RNA5SP68-201ENST00000363885 119 ntBASIC3.57□□□□□ -1.84
PTCD1O75127 Y_RNA.281-201ENST00000364774 94 ntBASIC3.57□□□□□ -1.84
PTCD1O75127 RNA5SP21-201ENST00000410917 96 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms