Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1□□□□□ -2.57
SSSCA1O60232 FGF7P1-201ENST00000582820 288 ntBASIC-1□□□□□ -2.57
SSSCA1O60232 MIR4264-201ENST00000583520 66 ntBASIC-1□□□□□ -2.57
SSSCA1O60232 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1□□□□□ -2.57
SSSCA1O60232 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1□□□□□ -2.57
SSSCA1O60232 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 RNU6-715P-201ENST00000365204 103 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 MIR876-201ENST00000401147 81 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 RNU6-387P-201ENST00000411331 105 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 MCFD2P1-201ENST00000417812 300 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.01□□□□□ -2.57
SSSCA1O60232 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 MIR4307-201ENST00000582802 84 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 AC244669.1-204ENST00000621564 178 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 AC068880.4-201ENST00000623082 495 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 MTND4P9-201ENST00000507819 1346 ntBASIC-1.01□□□□□ -2.57
SSSCA1O60232 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.02□□□□□ -2.57
SSSCA1O60232 RNU6-433P-201ENST00000363216 104 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 RNU4-32P-201ENST00000363404 141 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 RNA5SP192-201ENST00000364404 120 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 U8.6-201ENST00000364939 135 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 RNU6-376P-201ENST00000384731 106 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 MIR215-201ENST00000384858 110 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 MIR558-201ENST00000384920 94 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 MIR487A-201ENST00000385009 80 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 MTCYBP36-201ENST00000404146 440 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 USP9YP21-201ENST00000420603 432 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 HMGN1P33-201ENST00000432945 451 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.02□□□□□ -2.57
SSSCA1O60232 AC010486.3-201ENST00000511602 785 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 RNA5SP395-201ENST00000516567 118 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 RNY1P9-201ENST00000532431 109 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.02□□□□□ -2.57
SSSCA1O60232 AC006600.1-201ENST00000572529 153 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.02□□□□□ -2.57
SSSCA1O60232 AC006441.5-201ENST00000612680 209 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 MTND1P7-201ENST00000632801 297 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 AC091948.2-201ENST00000636510 279 ntBASIC-1.02□□□□□ -2.57
SSSCA1O60232 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.03□□□□□ -2.57
SSSCA1O60232 MIR1257-201ENST00000408490 117 ntBASIC-1.03□□□□□ -2.57
SSSCA1O60232 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.03□□□□□ -2.57
SSSCA1O60232 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.03□□□□□ -2.57
SSSCA1O60232 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.03□□□□□ -2.57
SSSCA1O60232 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.03□□□□□ -2.57
SSSCA1O60232 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.03□□□□□ -2.57
SSSCA1O60232 AL358944.1-201ENST00000528537 144 ntBASIC-1.03□□□□□ -2.57
SSSCA1O60232 AF250324.2-201ENST00000608299 610 ntBASIC-1.03□□□□□ -2.57
SSSCA1O60232 MIR8066-201ENST00000617280 78 ntBASIC-1.03□□□□□ -2.57
SSSCA1O60232 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 RNU6-179P-201ENST00000363350 107 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.04□□□□□ -2.58
SSSCA1O60232 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 RNU6-721P-201ENST00000410155 105 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.04□□□□□ -2.58
SSSCA1O60232 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.04□□□□□ -2.58
SSSCA1O60232 AC093023.1-201ENST00000547375 507 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 MIR5706-201ENST00000579841 80 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 MIR378D2-201ENST00000580636 98 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 AP001330.5-201ENST00000607176 411 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 AC105081.1-201ENST00000617727 106 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 AC137590.2-201ENST00000619709 240 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 AC022306.3-201ENST00000619930 550 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 AC010608.3-201ENST00000625048 527 ntBASIC-1.04□□□□□ -2.58
SSSCA1O60232 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 AL590002.1-201ENST00000406554 418 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 AC137499.1-201ENST00000427602 88 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 SNRPGP10-201ENST00000432323 225 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 AL358934.1-201ENST00000432346 324 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 AC108059.2-201ENST00000434626 151 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
SSSCA1O60232 MIR18B-201ENST00000454574 71 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 SCARNA18B-201ENST00000458806 135 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.05□□□□□ -2.58
SSSCA1O60232 AC010598.1-201ENST00000510378 103 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 MTND1P5-201ENST00000517906 940 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 MTATP6P15-201ENST00000527233 835 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 AC040926.1-201ENST00000530195 238 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 MIR4306-201ENST00000583390 91 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 AC069431.2-201ENST00000604149 1099 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 uc_338.4-201ENST00000616635 176 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 AC093726.3-201ENST00000637588 150 ntBASIC-1.05□□□□□ -2.58
SSSCA1O60232 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 RNU6-47P-201ENST00000383866 107 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 MTCO2P6-201ENST00000463134 685 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.06□□□□□ -2.58
SSSCA1O60232 RNA5SP461-201ENST00000516451 104 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 AL157687.1-201ENST00000554853 619 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 AGGF1P4-201ENST00000568249 801 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 MIR3165-201ENST00000579874 75 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.06□□□□□ -2.58
SSSCA1O60232 MIR4639-201ENST00000584938 69 ntBASIC-1.06□□□□□ -2.58
SSSCA1O60232 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms