Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 Y_RNA.310-201ENST00000365063 113 ntBASIC1.98□□□□□ -2.09
LDB2O43679 Y_RNA.341-201ENST00000365341 102 ntBASIC1.98□□□□□ -2.09
LDB2O43679 SNORA40.19-201ENST00000390846 128 ntBASIC1.98□□□□□ -2.09
LDB2O43679 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.98□□□□□ -2.09
LDB2O43679 AL135790.2-201ENST00000437701 267 ntBASIC1.98□□□□□ -2.09
LDB2O43679 SNORD2.1-201ENST00000458762 69 ntBASIC1.98□□□□□ -2.09
LDB2O43679 AC010409.1-201ENST00000487382 476 ntBASIC1.98□□□□□ -2.09
LDB2O43679 RNU6-1041P-201ENST00000516254 102 ntBASIC1.98□□□□□ -2.09
LDB2O43679 Y_RNA.679-201ENST00000516416 91 ntBASIC1.98□□□□□ -2.09
LDB2O43679 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.98□□□□□ -2.09
LDB2O43679 MIR4438-201ENST00000585271 93 ntBASIC1.98□□□□□ -2.09
LDB2O43679 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
LDB2O43679 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.98□□□□□ -2.09
LDB2O43679 U6.73-201ENST00000619194 103 ntBASIC1.98□□□□□ -2.09
LDB2O43679 MIR338-201ENST00000636369 67 ntBASIC1.98□□□□□ -2.09
LDB2O43679 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LDB2O43679 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LDB2O43679 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
LDB2O43679 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LDB2O43679 Y_RNA.122-201ENST00000363331 96 ntBASIC1.97□□□□□ -2.09
LDB2O43679 RNU1-22P-201ENST00000363334 158 ntBASIC1.97□□□□□ -2.09
LDB2O43679 Y_RNA.287-201ENST00000364853 94 ntBASIC1.97□□□□□ -2.09
LDB2O43679 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
LDB2O43679 RNU6-417P-201ENST00000384712 107 ntBASIC1.97□□□□□ -2.09
LDB2O43679 AC079804.2-201ENST00000490376 200 ntBASIC1.97□□□□□ -2.09
LDB2O43679 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.97□□□□□ -2.09
LDB2O43679 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.97□□□□□ -2.09
LDB2O43679 AC097462.1-201ENST00000514125 324 ntBASIC1.97□□□□□ -2.09
LDB2O43679 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.97□□□□□ -2.09
LDB2O43679 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.97□□□□□ -2.09
LDB2O43679 DEFB122-202ENST00000569013 197 ntBASIC1.97□□□□□ -2.09
LDB2O43679 MIR4769-201ENST00000584126 77 ntBASIC1.97□□□□□ -2.09
LDB2O43679 AC009779.6-201ENST00000603972 165 ntBASIC1.97□□□□□ -2.09
LDB2O43679 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.97□□□□□ -2.09
LDB2O43679 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
LDB2O43679 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
LDB2O43679 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.09
LDB2O43679 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
LDB2O43679 AL356292.1-201ENST00000283110 373 ntBASIC1.96□□□□□ -2.1
LDB2O43679 Y_RNA.76-201ENST00000362931 109 ntBASIC1.96□□□□□ -2.1
LDB2O43679 RNU6-801P-201ENST00000364087 105 ntBASIC1.96□□□□□ -2.1
LDB2O43679 SNORA72.4-201ENST00000384174 132 ntBASIC1.96□□□□□ -2.1
LDB2O43679 RNU6-763P-201ENST00000390865 106 ntBASIC1.96□□□□□ -2.1
LDB2O43679 RNU6-651P-201ENST00000411040 105 ntBASIC1.96□□□□□ -2.1
LDB2O43679 BTF3P11-201ENST00000426582 477 ntBASIC1.96□□□□□ -2.1
LDB2O43679 RPS20P10-201ENST00000451209 253 ntBASIC1.96□□□□□ -2.1
LDB2O43679 snoU13.23-201ENST00000458863 104 ntBASIC1.96□□□□□ -2.1
LDB2O43679 RPL36AP21-201ENST00000490372 323 ntBASIC1.96□□□□□ -2.1
LDB2O43679 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
LDB2O43679 RNU6-1278P-201ENST00000516130 107 ntBASIC1.96□□□□□ -2.1
LDB2O43679 AC015712.3-201ENST00000559380 164 ntBASIC1.96□□□□□ -2.1
LDB2O43679 MIR3668-201ENST00000582138 75 ntBASIC1.96□□□□□ -2.1
LDB2O43679 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
LDB2O43679 AL442067.1-201ENST00000613261 223 ntBASIC1.96□□□□□ -2.1
LDB2O43679 AC073349.3-201ENST00000617616 186 ntBASIC1.96□□□□□ -2.1
LDB2O43679 snoU18.1-201ENST00000629629 71 ntBASIC1.96□□□□□ -2.1
LDB2O43679 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LDB2O43679 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LDB2O43679 RNU1-96P-201ENST00000364163 162 ntBASIC1.95□□□□□ -2.1
LDB2O43679 RNU6-117P-201ENST00000365415 107 ntBASIC1.95□□□□□ -2.1
LDB2O43679 SNORD116-13-201ENST00000384408 92 ntBASIC1.95□□□□□ -2.1
LDB2O43679 MIR515-2-201ENST00000384883 83 ntBASIC1.95□□□□□ -2.1
LDB2O43679 MIR515-1-201ENST00000384884 83 ntBASIC1.95□□□□□ -2.1
LDB2O43679 MIR764-201ENST00000390811 85 ntBASIC1.95□□□□□ -2.1
LDB2O43679 SNORA26.5-201ENST00000391215 123 ntBASIC1.95□□□□□ -2.1
LDB2O43679 HMGN2P39-201ENST00000398005 273 ntBASIC1.95□□□□□ -2.1
LDB2O43679 AL117342.1-201ENST00000404861 406 ntBASIC1.95□□□□□ -2.1
LDB2O43679 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.95□□□□□ -2.1
LDB2O43679 RNU2-14P-201ENST00000411053 191 ntBASIC1.95□□□□□ -2.1
LDB2O43679 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
LDB2O43679 CST2P1-201ENST00000425770 87 ntBASIC1.95□□□□□ -2.1
LDB2O43679 Y_RNA.638-201ENST00000459374 113 ntBASIC1.95□□□□□ -2.1
LDB2O43679 Y_RNA.637-201ENST00000459424 114 ntBASIC1.95□□□□□ -2.1
LDB2O43679 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
LDB2O43679 RNU7-172P-201ENST00000517125 64 ntBASIC1.95□□□□□ -2.1
LDB2O43679 AC007229.1-201ENST00000590455 412 ntBASIC1.95□□□□□ -2.1
LDB2O43679 AC004832.4-201ENST00000608952 331 ntBASIC1.95□□□□□ -2.1
LDB2O43679 AP006437.1-201ENST00000641440 3685 ntBASIC1.95□□□□□ -2.1
LDB2O43679 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LDB2O43679 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LDB2O43679 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.94□□□□□ -2.1
LDB2O43679 Y_RNA.172-201ENST00000363765 102 ntBASIC1.94□□□□□ -2.1
LDB2O43679 RNU6-211P-201ENST00000384047 107 ntBASIC1.94□□□□□ -2.1
LDB2O43679 MIR518A2-201ENST00000384966 87 ntBASIC1.94□□□□□ -2.1
LDB2O43679 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LDB2O43679 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.94□□□□□ -2.1
LDB2O43679 COX6CP14-201ENST00000469580 174 ntBASIC1.94□□□□□ -2.1
LDB2O43679 RNU6-237P-201ENST00000515985 71 ntBASIC1.94□□□□□ -2.1
LDB2O43679 SNORD116-28-201ENST00000516123 91 ntBASIC1.94□□□□□ -2.1
LDB2O43679 AC005786.1-201ENST00000588553 154 ntBASIC1.94□□□□□ -2.1
LDB2O43679 AL008718.3-201ENST00000610217 321 ntBASIC1.94□□□□□ -2.1
LDB2O43679 AL359075.3-201ENST00000613288 217 ntBASIC1.94□□□□□ -2.1
LDB2O43679 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LDB2O43679 Y_RNA.200-201ENST00000364018 102 ntBASIC1.93□□□□□ -2.1
LDB2O43679 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
LDB2O43679 Y_RNA.292-201ENST00000364904 97 ntBASIC1.93□□□□□ -2.1
LDB2O43679 RNA5SP465-201ENST00000391195 109 ntBASIC1.93□□□□□ -2.1
LDB2O43679 RNU11-5P-201ENST00000391216 129 ntBASIC1.93□□□□□ -2.1
LDB2O43679 MIR1283-2-201ENST00000408621 87 ntBASIC1.93□□□□□ -2.1
LDB2O43679 MIR1298-201ENST00000408783 112 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms