Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
PROM1O43490 AC016909.1-201ENST00000415916 166 ntBASIC2.39□□□□□ -2.03
PROM1O43490 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
PROM1O43490 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.39□□□□□ -2.03
PROM1O43490 SNORA31.11-201ENST00000516528 139 ntBASIC2.39□□□□□ -2.03
PROM1O43490 RNU6-1007P-201ENST00000516586 107 ntBASIC2.39□□□□□ -2.03
PROM1O43490 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
PROM1O43490 MTND5P41-201ENST00000517498 206 ntBASIC2.39□□□□□ -2.03
PROM1O43490 MIR4724-201ENST00000579485 89 ntBASIC2.39□□□□□ -2.03
PROM1O43490 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.39□□□□□ -2.03
PROM1O43490 AC245060.5-201ENST00000610778 3293 ntBASIC2.39□□□□□ -2.03
PROM1O43490 U8.2-201ENST00000363156 134 ntBASIC2.38□□□□□ -2.03
PROM1O43490 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
PROM1O43490 Y_RNA.398-201ENST00000383952 99 ntBASIC2.38□□□□□ -2.03
PROM1O43490 RNU6-136P-201ENST00000384663 107 ntBASIC2.38□□□□□ -2.03
PROM1O43490 SNORA36B-201ENST00000410438 131 ntBASIC2.38□□□□□ -2.03
PROM1O43490 RNU6-1135P-201ENST00000411083 103 ntBASIC2.38□□□□□ -2.03
PROM1O43490 RNU5E-9P-201ENST00000411164 104 ntBASIC2.38□□□□□ -2.03
PROM1O43490 SEPT7P4-201ENST00000437076 306 ntBASIC2.38□□□□□ -2.03
PROM1O43490 AL357134.1-201ENST00000445848 426 ntBASIC2.38□□□□□ -2.03
PROM1O43490 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.38□□□□□ -2.03
PROM1O43490 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.38□□□□□ -2.03
PROM1O43490 AC245047.8-201ENST00000456455 284 ntBASIC2.38□□□□□ -2.03
PROM1O43490 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.38□□□□□ -2.03
PROM1O43490 RNU7-115P-201ENST00000516433 55 ntBASIC2.38□□□□□ -2.03
PROM1O43490 RNA5SP148-201ENST00000516527 94 ntBASIC2.38□□□□□ -2.03
PROM1O43490 RNU6-789P-201ENST00000517105 102 ntBASIC2.38□□□□□ -2.03
PROM1O43490 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.38□□□□□ -2.03
PROM1O43490 POLR3GP1-201ENST00000594073 261 ntBASIC2.38□□□□□ -2.03
PROM1O43490 AC005972.2-201ENST00000604690 348 ntBASIC2.38□□□□□ -2.03
PROM1O43490 U4.3-201ENST00000621047 82 ntBASIC2.38□□□□□ -2.03
PROM1O43490 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.38□□□□□ -2.03
PROM1O43490 AC006435.5-201ENST00000624486 112 ntBASIC2.38□□□□□ -2.03
PROM1O43490 Y_RNA.75-201ENST00000362927 97 ntBASIC2.37□□□□□ -2.03
PROM1O43490 RNU6-103P-201ENST00000363686 107 ntBASIC2.37□□□□□ -2.03
PROM1O43490 RNU6-312P-201ENST00000364629 107 ntBASIC2.37□□□□□ -2.03
PROM1O43490 Y_RNA.272-201ENST00000364696 102 ntBASIC2.37□□□□□ -2.03
PROM1O43490 Y_RNA.332-201ENST00000365271 113 ntBASIC2.37□□□□□ -2.03
PROM1O43490 RNU6-144P-201ENST00000383951 107 ntBASIC2.37□□□□□ -2.03
PROM1O43490 SNORD116-18-201ENST00000383961 92 ntBASIC2.37□□□□□ -2.03
PROM1O43490 SNORA67.4-201ENST00000384688 142 ntBASIC2.37□□□□□ -2.03
PROM1O43490 MIR526A2-201ENST00000390198 65 ntBASIC2.37□□□□□ -2.03
PROM1O43490 RNU2-48P-201ENST00000410694 191 ntBASIC2.37□□□□□ -2.03
PROM1O43490 RNU6-394P-201ENST00000410735 107 ntBASIC2.37□□□□□ -2.03
PROM1O43490 RNU6-383P-201ENST00000410864 94 ntBASIC2.37□□□□□ -2.03
PROM1O43490 AC010154.1-201ENST00000425857 269 ntBASIC2.37□□□□□ -2.03
PROM1O43490 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.37□□□□□ -2.03
PROM1O43490 MTCO1P44-201ENST00000441935 243 ntBASIC2.37□□□□□ -2.03
PROM1O43490 AL392103.1-201ENST00000447000 198 ntBASIC2.37□□□□□ -2.03
PROM1O43490 RPL23AP54-201ENST00000495129 419 ntBASIC2.37□□□□□ -2.03
PROM1O43490 RNU6-346P-201ENST00000516288 111 ntBASIC2.37□□□□□ -2.03
PROM1O43490 CYCSP26-201ENST00000534107 320 ntBASIC2.37□□□□□ -2.03
PROM1O43490 MIR4744-201ENST00000581563 82 ntBASIC2.37□□□□□ -2.03
PROM1O43490 AC012640.5-201ENST00000623897 319 ntBASIC2.37□□□□□ -2.03
PROM1O43490 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PROM1O43490 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PROM1O43490 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PROM1O43490 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PROM1O43490 Y_RNA.441-201ENST00000384123 112 ntBASIC2.36□□□□□ -2.03
PROM1O43490 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PROM1O43490 SNORD23.1-201ENST00000408212 104 ntBASIC2.36□□□□□ -2.03
PROM1O43490 AL135786.1-201ENST00000415892 214 ntBASIC2.36□□□□□ -2.03
PROM1O43490 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.36□□□□□ -2.03
PROM1O43490 HMGN2P34-201ENST00000437647 269 ntBASIC2.36□□□□□ -2.03
PROM1O43490 AC009238.1-201ENST00000442165 424 ntBASIC2.36□□□□□ -2.03
PROM1O43490 AC009237.6-201ENST00000446969 424 ntBASIC2.36□□□□□ -2.03
PROM1O43490 RNU7-200P-201ENST00000516105 62 ntBASIC2.36□□□□□ -2.03
PROM1O43490 RNA5SP320-201ENST00000516263 124 ntBASIC2.36□□□□□ -2.03
PROM1O43490 RNU6-453P-201ENST00000516819 85 ntBASIC2.36□□□□□ -2.03
PROM1O43490 MIR4438-201ENST00000585271 93 ntBASIC2.36□□□□□ -2.03
PROM1O43490 AP003357.1-201ENST00000604497 148 ntBASIC2.36□□□□□ -2.03
PROM1O43490 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.36□□□□□ -2.03
PROM1O43490 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.36□□□□□ -2.03
PROM1O43490 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
PROM1O43490 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
PROM1O43490 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PROM1O43490 CENPCP1-201ENST00000533085 2578 ntBASIC2.35□□□□□ -2.03
PROM1O43490 Y_RNA.23-201ENST00000362496 106 ntBASIC2.35□□□□□ -2.03
PROM1O43490 RNU6-275P-201ENST00000364910 107 ntBASIC2.35□□□□□ -2.03
PROM1O43490 RNU6-1130P-201ENST00000365434 107 ntBASIC2.35□□□□□ -2.03
PROM1O43490 SNORA25B-201ENST00000365507 128 ntBASIC2.35□□□□□ -2.03
PROM1O43490 SNORA80E-201ENST00000384744 137 ntBASIC2.35□□□□□ -2.03
PROM1O43490 RNU6-578P-201ENST00000390980 103 ntBASIC2.35□□□□□ -2.03
PROM1O43490 RNA5SP511-201ENST00000410487 115 ntBASIC2.35□□□□□ -2.03
PROM1O43490 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
PROM1O43490 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.35□□□□□ -2.03
PROM1O43490 snoU13.15-201ENST00000459407 104 ntBASIC2.35□□□□□ -2.03
PROM1O43490 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
PROM1O43490 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.35□□□□□ -2.03
PROM1O43490 RNU7-116P-201ENST00000516940 62 ntBASIC2.35□□□□□ -2.03
PROM1O43490 RNU6-856P-201ENST00000516959 98 ntBASIC2.35□□□□□ -2.03
PROM1O43490 RNU7-172P-201ENST00000517125 64 ntBASIC2.35□□□□□ -2.03
PROM1O43490 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PROM1O43490 AC108706.1-201ENST00000611053 297 ntBASIC2.35□□□□□ -2.03
PROM1O43490 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
PROM1O43490 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
PROM1O43490 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PROM1O43490 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
PROM1O43490 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
PROM1O43490 Y_RNA.229-201ENST00000364347 113 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms