Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RNU7-172P-201ENST00000517125 64 ntBASIC1.76□□□□□ -2.13
ATP2A1O14983 AC103810.8-201ENST00000607347 118 ntBASIC1.76□□□□□ -2.13
ATP2A1O14983 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ATP2A1O14983 Y_RNA.276-201ENST00000364732 109 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ATP2A1O14983 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 RNU6-985P-201ENST00000410182 104 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 RNU7-94P-201ENST00000459576 63 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 RNU6-436P-201ENST00000516171 114 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 RNU6-764P-201ENST00000516396 105 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 RNU7-110P-201ENST00000516891 62 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 RNU6-1137P-201ENST00000517073 99 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 RNU6-897P-201ENST00000517135 105 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 SNORA31.24-201ENST00000517232 57 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.75□□□□□ -2.13
ATP2A1O14983 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.75□□□□□ -2.13
ATP2A1O14983 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.75□□□□□ -2.13
ATP2A1O14983 AC136932.1-201ENST00000574771 208 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 MIR4719-201ENST00000585233 84 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.75□□□□□ -2.13
ATP2A1O14983 RNU6-324P-201ENST00000363957 106 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 Y_RNA.331-201ENST00000365267 102 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 RNU6-117P-201ENST00000365415 107 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 RNU6-505P-201ENST00000384427 107 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 RNU2-61P-201ENST00000411069 191 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 RNA5SP247-201ENST00000411181 105 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.74□□□□□ -2.13
ATP2A1O14983 HSPE1P9-201ENST00000440046 311 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.74□□□□□ -2.13
ATP2A1O14983 RPL36AP21-201ENST00000490372 323 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 TRMT112P2-201ENST00000512910 132 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 AC131281.1-201ENST00000522984 164 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.74□□□□□ -2.13
ATP2A1O14983 Y_RNA.812-201ENST00000610788 101 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 Y_RNA.784-201ENST00000613803 101 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 Y_RNA.787-201ENST00000616522 101 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 MIR376A1-201ENST00000616574 68 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 Y_RNA.780-201ENST00000617336 101 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 Y_RNA.801-201ENST00000619005 101 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 AC127459.3-201ENST00000624328 466 ntBASIC1.74□□□□□ -2.13
ATP2A1O14983 Y_RNA.152-201ENST00000363578 100 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 RNU6-21P-201ENST00000384710 107 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.73□□□□□ -2.13
ATP2A1O14983 RPS27P1-201ENST00000450552 247 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 HSPE1P13-201ENST00000451143 297 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 AC009474.2-201ENST00000451383 136 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 AC008834.1-201ENST00000511612 175 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 RNU6-1046P-201ENST00000516538 107 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 RPL21P9-201ENST00000556149 474 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 AC015720.1-201ENST00000565251 277 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 MIR4300-201ENST00000581016 96 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 AC006504.6-201ENST00000590142 199 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 AC073413.2-201ENST00000604332 360 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 AC018630.2-201ENST00000534866 2403 ntBASIC1.73□□□□□ -2.13
ATP2A1O14983 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ATP2A1O14983 Y_RNA.153-201ENST00000363615 91 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 RNU6-360P-201ENST00000390944 104 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 SNORD115-46-201ENST00000390982 71 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 RNA5SP109-201ENST00000391010 116 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 AL590004.1-201ENST00000405321 300 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 SEPT14P8-201ENST00000508026 178 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 SNORA40.15-201ENST00000516884 107 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
ATP2A1O14983 AL161670.1-201ENST00000554348 137 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 AC022217.4-201ENST00000604389 163 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 SNORD113-5-201ENST00000607261 78 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
ATP2A1O14983 ZNF209P-201ENST00000593450 2304 ntBASIC1.72□□□□□ -2.13
ATP2A1O14983 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ATP2A1O14983 MIR337-201ENST00000362281 93 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 SNORD81.1-201ENST00000363064 77 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 Y_RNA.210-201ENST00000364161 110 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 RNU6-392P-201ENST00000364926 101 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 Y_RNA.329-201ENST00000365209 107 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 RNU6-950P-201ENST00000384651 107 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 RNU6-376P-201ENST00000384731 106 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 RNU4-30P-201ENST00000410245 143 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 AL606517.2-201ENST00000442855 241 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 snoU13.27-201ENST00000459278 104 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 MIR4421-201ENST00000578133 69 ntBASIC1.71□□□□□ -2.14
ATP2A1O14983 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.7□□□□□ -2.14
ATP2A1O14983 RNU6-1160P-201ENST00000384546 104 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 MIR562-201ENST00000384894 95 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 RPL21P1-201ENST00000399532 476 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 RNU6-710P-201ENST00000410424 105 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.7□□□□□ -2.14
ATP2A1O14983 AC245047.3-201ENST00000429428 127 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 FTH1P12-201ENST00000432137 551 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 AC010655.3-201ENST00000478818 450 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.7□□□□□ -2.14
ATP2A1O14983 AC025465.3-201ENST00000510570 311 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 RNU6-1143P-201ENST00000516125 104 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 RNU6-1337P-201ENST00000516525 95 ntBASIC1.7□□□□□ -2.14
ATP2A1O14983 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms