Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC109347.2-201ENST00000610220 349 ntBASIC0.13□□□□□ -2.39
CHD2O14647 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CHD2O14647 MIR411-201ENST00000362239 96 ntBASIC0.12□□□□□ -2.39
CHD2O14647 RNY1P16-201ENST00000363063 111 ntBASIC0.12□□□□□ -2.39
CHD2O14647 AL365203.2-201ENST00000423444 196 ntBASIC0.12□□□□□ -2.39
CHD2O14647 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.12□□□□□ -2.39
CHD2O14647 CYCTP-201ENST00000504253 315 ntBASIC0.12□□□□□ -2.39
CHD2O14647 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.12□□□□□ -2.39
CHD2O14647 AC114811.1-201ENST00000507207 168 ntBASIC0.12□□□□□ -2.39
CHD2O14647 RNU6-977P-201ENST00000516411 103 ntBASIC0.12□□□□□ -2.39
CHD2O14647 AC022523.2-201ENST00000561045 150 ntBASIC0.12□□□□□ -2.39
CHD2O14647 MIR4305-201ENST00000583252 102 ntBASIC0.12□□□□□ -2.39
CHD2O14647 AC006380.1-201ENST00000603598 186 ntBASIC0.12□□□□□ -2.39
CHD2O14647 AC093424.1-201ENST00000604999 338 ntBASIC0.12□□□□□ -2.39
CHD2O14647 AC005828.6-201ENST00000606610 232 ntBASIC0.12□□□□□ -2.39
CHD2O14647 AL050303.3-201ENST00000613704 284 ntBASIC0.12□□□□□ -2.39
CHD2O14647 SNORA9.1-201ENST00000362412 131 ntBASIC0.11□□□□□ -2.39
CHD2O14647 RNU4-45P-201ENST00000365469 141 ntBASIC0.11□□□□□ -2.39
CHD2O14647 RNU6-125P-201ENST00000384505 107 ntBASIC0.11□□□□□ -2.39
CHD2O14647 MIR1302-7-201ENST00000408841 72 ntBASIC0.11□□□□□ -2.39
CHD2O14647 RNU6-613P-201ENST00000410412 108 ntBASIC0.11□□□□□ -2.39
CHD2O14647 RNU6-177P-201ENST00000411257 104 ntBASIC0.11□□□□□ -2.39
CHD2O14647 RNU6-1304P-201ENST00000411374 106 ntBASIC0.11□□□□□ -2.39
CHD2O14647 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.11□□□□□ -2.39
CHD2O14647 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.11□□□□□ -2.39
CHD2O14647 ELOCP24-201ENST00000456370 334 ntBASIC0.11□□□□□ -2.39
CHD2O14647 AC083904.1-201ENST00000487828 231 ntBASIC0.11□□□□□ -2.39
CHD2O14647 RPL23AP54-201ENST00000495129 419 ntBASIC0.11□□□□□ -2.39
CHD2O14647 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.11□□□□□ -2.39
CHD2O14647 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.11□□□□□ -2.39
CHD2O14647 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.11□□□□□ -2.39
CHD2O14647 Y_RNA.148-201ENST00000363557 117 ntBASIC0.1□□□□□ -2.39
CHD2O14647 snoU2-30.1-201ENST00000365012 70 ntBASIC0.1□□□□□ -2.39
CHD2O14647 SNORA72.3-201ENST00000365074 132 ntBASIC0.1□□□□□ -2.39
CHD2O14647 CALM2P3-201ENST00000400429 449 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AL354751.2-201ENST00000415471 210 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AL358934.1-201ENST00000432346 324 ntBASIC0.1□□□□□ -2.39
CHD2O14647 MTND1P26-201ENST00000440488 538 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.1□□□□□ -2.39
CHD2O14647 UBE2V1P7-201ENST00000446395 340 ntBASIC0.1□□□□□ -2.39
CHD2O14647 MTND1P11-201ENST00000456661 876 ntBASIC0.1□□□□□ -2.39
CHD2O14647 snoU13.21-201ENST00000459368 105 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AC108740.1-201ENST00000498629 225 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AC093023.1-201ENST00000547375 507 ntBASIC0.1□□□□□ -2.39
CHD2O14647 MIR548AR-201ENST00000582191 57 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AC087752.4-201ENST00000605911 462 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AC007684.1-201ENST00000609671 477 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AC087588.2-201ENST00000617667 426 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AL627230.5-201ENST00000619807 58 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AC092634.7-201ENST00000621022 103 ntBASIC0.1□□□□□ -2.39
CHD2O14647 U6.115-201ENST00000636045 103 ntBASIC0.1□□□□□ -2.39
CHD2O14647 MIR6863-201ENST00000636112 90 ntBASIC0.1□□□□□ -2.39
CHD2O14647 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.1□□□□□ -2.39
CHD2O14647 RNU6-454P-201ENST00000364292 107 ntBASIC0.1□□□□□ -2.39
CHD2O14647 RNU6-117P-201ENST00000365415 107 ntBASIC0.1□□□□□ -2.39
CHD2O14647 SNORD38C-201ENST00000384381 69 ntBASIC0.1□□□□□ -2.39
CHD2O14647 MTCO3P10-201ENST00000455912 772 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AL355375.2-201ENST00000574825 175 ntBASIC0.1□□□□□ -2.39
CHD2O14647 AC027449.1-201ENST00000608890 407 ntBASIC0.1□□□□□ -2.39
CHD2O14647 MIR520F-201ENST00000384824 87 ntBASIC0.09□□□□□ -2.39
CHD2O14647 MIR573-201ENST00000384964 99 ntBASIC0.09□□□□□ -2.39
CHD2O14647 MIR516B2-201ENST00000385190 85 ntBASIC0.09□□□□□ -2.39
CHD2O14647 Z95118.1-201ENST00000421372 247 ntBASIC0.09□□□□□ -2.39
CHD2O14647 ERLEC1P1-201ENST00000433806 578 ntBASIC0.09□□□□□ -2.39
CHD2O14647 AL031667.1-201ENST00000440222 725 ntBASIC0.09□□□□□ -2.39
CHD2O14647 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.09□□□□□ -2.39
CHD2O14647 RN7SKP164-201ENST00000516138 266 ntBASIC0.09□□□□□ -2.39
CHD2O14647 ZNF519P2-201ENST00000557032 169 ntBASIC0.09□□□□□ -2.39
CHD2O14647 AL162413.1-201ENST00000603198 110 ntBASIC0.09□□□□□ -2.39
CHD2O14647 AC019193.3-201ENST00000609144 554 ntBASIC0.09□□□□□ -2.39
CHD2O14647 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.09□□□□□ -2.39
CHD2O14647 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.09□□□□□ -2.39
CHD2O14647 AL603755.1-201ENST00000619504 163 ntBASIC0.09□□□□□ -2.39
CHD2O14647 MIR6079-201ENST00000635807 62 ntBASIC0.09□□□□□ -2.39
CHD2O14647 MIR18A-201ENST00000362310 71 ntBASIC0.08□□□□□ -2.4
CHD2O14647 MIR520H-201ENST00000385126 88 ntBASIC0.08□□□□□ -2.4
CHD2O14647 MTATP6P13-201ENST00000438531 667 ntBASIC0.08□□□□□ -2.4
CHD2O14647 AC083798.1-201ENST00000472671 131 ntBASIC0.08□□□□□ -2.4
CHD2O14647 AC018710.1-201ENST00000506509 158 ntBASIC0.08□□□□□ -2.4
CHD2O14647 RNU6-1116P-201ENST00000517269 99 ntBASIC0.08□□□□□ -2.4
CHD2O14647 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.08□□□□□ -2.4
CHD2O14647 LARP7P1-201ENST00000605576 316 ntBASIC0.08□□□□□ -2.4
CHD2O14647 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
CHD2O14647 Y_RNA.370-201ENST00000365589 108 ntBASIC0.08□□□□□ -2.4
CHD2O14647 Y_RNA.533-201ENST00000384596 114 ntBASIC0.08□□□□□ -2.4
CHD2O14647 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
CHD2O14647 MRPS10P2-201ENST00000431226 381 ntBASIC0.08□□□□□ -2.4
CHD2O14647 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD2O14647 AC022616.4-201ENST00000522985 181 ntBASIC0.08□□□□□ -2.4
CHD2O14647 AF250324.2-201ENST00000608299 610 ntBASIC0.08□□□□□ -2.4
CHD2O14647 RNU6-580P-201ENST00000365159 107 ntBASIC0.07□□□□□ -2.4
CHD2O14647 SNORA69-201ENST00000383895 132 ntBASIC0.07□□□□□ -2.4
CHD2O14647 Y_RNA.537-201ENST00000384626 109 ntBASIC0.07□□□□□ -2.4
CHD2O14647 RNU6-332P-201ENST00000391193 108 ntBASIC0.07□□□□□ -2.4
CHD2O14647 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD2O14647 SNORD5.1-201ENST00000458800 75 ntBASIC0.07□□□□□ -2.4
CHD2O14647 RNU6-107P-201ENST00000516643 102 ntBASIC0.07□□□□□ -2.4
CHD2O14647 Y_RNA.706-201ENST00000516933 99 ntBASIC0.07□□□□□ -2.4
CHD2O14647 AC104260.1-201ENST00000616660 539 ntBASIC0.07□□□□□ -2.4
CHD2O14647 AL008636.1-201ENST00000625038 1018 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms