Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TRBV12-1-201ENST00000479785 344 ntBASIC2.28□□□□□ -2.04
FOXN3O00409 AC107393.1-201ENST00000512403 346 ntBASIC2.28□□□□□ -2.04
FOXN3O00409 RNA5SP20-201ENST00000515976 84 ntBASIC2.28□□□□□ -2.04
FOXN3O00409 AC069114.2-201ENST00000604699 304 ntBASIC2.28□□□□□ -2.04
FOXN3O00409 AL353149.1-201ENST00000610667 244 ntBASIC2.28□□□□□ -2.04
FOXN3O00409 SNORA27.1-201ENST00000362604 124 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.82-201ENST00000363000 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.92-201ENST00000363043 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.235-201ENST00000364412 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.270-201ENST00000364693 104 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.306-201ENST00000365015 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.308-201ENST00000365043 101 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.312-201ENST00000365089 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.322-201ENST00000365151 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 RNY4P28-201ENST00000365281 93 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 MIR1261-201ENST00000408659 82 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.27□□□□□ -2.05
FOXN3O00409 HMGN2P38-201ENST00000423806 265 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.650-201ENST00000459002 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 AC090255.1-201ENST00000495779 349 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 RNU6-436P-201ENST00000516171 114 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.777-201ENST00000516982 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXN3O00409 AP002392.1-201ENST00000537692 208 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.771-201ENST00000598668 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 AL096840.1-201ENST00000603287 93 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 AC011921.3-201ENST00000605540 361 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 AC098479.1-201ENST00000609225 154 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 Y_RNA.789-201ENST00000622480 102 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 snoU18.1-201ENST00000629629 71 ntBASIC2.27□□□□□ -2.05
FOXN3O00409 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXN3O00409 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
FOXN3O00409 UBE2WP1-201ENST00000362030 340 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 RNU6-271P-201ENST00000363858 105 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 RNU6-1048P-201ENST00000364054 107 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 Y_RNA.785-201ENST00000384290 109 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 RNU6-136P-201ENST00000384663 107 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 SNORA48.1-201ENST00000390879 135 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 MIR873-201ENST00000401120 77 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 CST2P1-201ENST00000425770 87 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 AL135790.2-201ENST00000437701 267 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 AL138752.1-201ENST00000452964 351 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 Y_RNA.638-201ENST00000459374 113 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.26□□□□□ -2.05
FOXN3O00409 AC008413.1-201ENST00000511864 177 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 MRPS17P9-201ENST00000511924 393 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 RNU1-142P-201ENST00000516682 145 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.26□□□□□ -2.05
FOXN3O00409 AL008718.3-201ENST00000610217 321 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 AL359075.3-201ENST00000613288 217 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 MIR6715A-201ENST00000615929 79 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 U1.36-201ENST00000620684 176 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.26□□□□□ -2.05
FOXN3O00409 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
FOXN3O00409 Y_RNA.217-201ENST00000364214 105 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 RNA5SP160-201ENST00000364866 120 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 RNU6-211P-201ENST00000384047 107 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 MIR676-201ENST00000390702 67 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 AL023284.1-201ENST00000403956 276 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 RNU2-7P-201ENST00000410794 178 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 COX6CP10-201ENST00000416832 224 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.25□□□□□ -2.05
FOXN3O00409 Y_RNA.641-201ENST00000459414 105 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 AC074198.2-201ENST00000508153 258 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 RNU6-63P-201ENST00000516690 95 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 RNU7-172P-201ENST00000517125 64 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.25□□□□□ -2.05
FOXN3O00409 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
FOXN3O00409 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.25□□□□□ -2.05
FOXN3O00409 FTX_2.1-201ENST00000618816 94 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
FOXN3O00409 CENPCP1-201ENST00000533085 2578 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
FOXN3O00409 AC134026.1-201ENST00000623249 2239 ntBASIC2.25□□□□□ -2.05
FOXN3O00409 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
FOXN3O00409 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.24□□□□□ -2.05
FOXN3O00409 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
FOXN3O00409 AL356292.1-201ENST00000283110 373 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 RNU6-1272P-201ENST00000362776 107 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 RNU6-376P-201ENST00000384731 106 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 RN7SKP51-201ENST00000410781 304 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 RPL23AP7-203ENST00000449021 469 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 SNORA70.12-201ENST00000516084 153 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 RNU6-861P-201ENST00000516745 106 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 CBX3P4-201ENST00000538909 354 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 MIR4282-201ENST00000583613 67 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 AC104984.5-201ENST00000586878 94 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 AC073413.2-201ENST00000604332 360 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 AL365434.2-201ENST00000607979 234 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 U6.73-201ENST00000619194 103 ntBASIC2.24□□□□□ -2.05
FOXN3O00409 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
FOXN3O00409 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
FOXN3O00409 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
FOXN3O00409 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
FOXN3O00409 SNORA67.3-201ENST00000384366 140 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 RNU6-763P-201ENST00000390865 106 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms