Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MIR3674-201ENST00000636576 68 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 MIR1321-201ENST00000637766 79 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 RNA5SP48-201ENST00000363969 126 ntBASIC0.38□□□□□ -2.35
UPK1AO00322 Y_RNA.364-201ENST00000365532 101 ntBASIC0.38□□□□□ -2.35
UPK1AO00322 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
UPK1AO00322 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.38□□□□□ -2.35
UPK1AO00322 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.38□□□□□ -2.35
UPK1AO00322 AC093027.1-201ENST00000546698 429 ntBASIC0.38□□□□□ -2.35
UPK1AO00322 AC011195.1-201ENST00000578177 177 ntBASIC0.38□□□□□ -2.35
UPK1AO00322 AC009229.3-201ENST00000608056 282 ntBASIC0.38□□□□□ -2.35
UPK1AO00322 AC245008.1-201ENST00000608123 476 ntBASIC0.38□□□□□ -2.35
UPK1AO00322 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
UPK1AO00322 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
UPK1AO00322 RNU6-1067P-201ENST00000384752 107 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 MIR1287-201ENST00000408492 90 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 MIR1185-1-201ENST00000408598 86 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 RNU2-16P-201ENST00000410712 136 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 AL354751.2-201ENST00000415471 210 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 AL139396.1-201ENST00000421137 167 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 DLGAP5P1-201ENST00000430307 464 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 MTATP6P17-201ENST00000431030 672 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 ELOCP24-201ENST00000456370 334 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 RNU7-41P-201ENST00000515917 61 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 RNU6-864P-201ENST00000516256 108 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 RNU6-314P-201ENST00000516574 104 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 SNORA18.7-201ENST00000516910 131 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 MTND4LP26-201ENST00000518144 282 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 AL078603.1-201ENST00000603824 313 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 AL591926.4-201ENST00000616895 298 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 AC090617.10-201ENST00000624308 134 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 MIR3662-201ENST00000637030 95 ntBASIC0.37□□□□□ -2.35
UPK1AO00322 MIR410-201ENST00000362222 80 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 RNU6-1084P-201ENST00000362498 107 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 SNORD114-7-201ENST00000362520 77 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
UPK1AO00322 RNU6-1310P-201ENST00000384153 107 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 RNU1-119P-201ENST00000391122 165 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 SNORD111-201ENST00000408139 94 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 RNA5SP222-201ENST00000411039 105 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 MTCYBP10-201ENST00000424905 650 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.36□□□□□ -2.35
UPK1AO00322 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.36□□□□□ -2.35
UPK1AO00322 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.36□□□□□ -2.35
UPK1AO00322 RNU7-43P-201ENST00000516554 64 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 AP003716.2-201ENST00000528260 108 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 MIR4764-201ENST00000580680 88 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 AC005828.6-201ENST00000606610 232 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 RNU6-94P-201ENST00000607728 107 ntBASIC0.36□□□□□ -2.35
UPK1AO00322 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.36□□□□□ -2.35
UPK1AO00322 RNU6-454P-201ENST00000364292 107 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 SNORA36.2-201ENST00000384004 127 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 RNU6-842P-201ENST00000384269 107 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 RNA5SP511-201ENST00000410487 115 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 MLLT10P1-201ENST00000418346 262 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 SNORD5.1-201ENST00000458800 75 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 RNU6-566P-201ENST00000516790 107 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 AC109635.3-201ENST00000529536 185 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 MIR4300-201ENST00000581016 96 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 AC024614.3-201ENST00000637860 256 ntBASIC0.35□□□□□ -2.35
UPK1AO00322 Y_RNA.51-201ENST00000362725 102 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 U8.5-201ENST00000364528 136 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 Y_RNA.557-201ENST00000384680 107 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 RNU6-1237P-201ENST00000384777 107 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.34□□□□□ -2.36
UPK1AO00322 SNORA40.9-201ENST00000515895 93 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 RNU6-496P-201ENST00000516145 99 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 RNA5SP220-201ENST00000516298 104 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 RNU6-1088P-201ENST00000516850 104 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 RNU11-2P-201ENST00000516898 142 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 AF235103.2-201ENST00000525753 346 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.34□□□□□ -2.36
UPK1AO00322 MIR4790-201ENST00000577799 79 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 AC100810.6-201ENST00000638068 285 ntBASIC0.34□□□□□ -2.36
UPK1AO00322 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 RNY1P16-201ENST00000363063 111 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 RNU6-1090P-201ENST00000364065 94 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 Y_RNA.243-201ENST00000364481 109 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 AC117470.1-201ENST00000381974 330 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 RNY1P14-201ENST00000384426 108 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 AL390729.2-201ENST00000416137 156 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 AC005534.2-201ENST00000431047 433 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 MTND1P17-201ENST00000448961 204 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 RNU6-1132P-201ENST00000459214 107 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 RN7SKP164-201ENST00000516138 266 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 RNU6-506P-201ENST00000516553 94 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 RNU6-1314P-201ENST00000517139 104 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 AC036111.3-201ENST00000526389 112 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 MIR4711-201ENST00000578274 70 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 MIR5701-3-201ENST00000578890 82 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 SNORA4-201ENST00000584302 138 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 MIR5701-1-201ENST00000585138 82 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 MIR4762-201ENST00000585261 75 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 MIR5701-2-201ENST00000615634 82 ntBASIC0.33□□□□□ -2.36
UPK1AO00322 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms