Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
PDLIM1O00151 SNORD114-7-201ENST00000362520 77 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RNU6-324P-201ENST00000363957 106 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 Y_RNA.263-201ENST00000364659 114 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RNU6-708P-201ENST00000384217 107 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 Y_RNA.463-201ENST00000384271 102 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RNU6-505P-201ENST00000384427 107 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 MIR520G-201ENST00000385064 90 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.14□□□□□ -2.23
PDLIM1O00151 Y_RNA.621-201ENST00000411065 96 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 CALM2P4-201ENST00000430810 426 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.14□□□□□ -2.23
PDLIM1O00151 SNORD19B-201ENST00000459623 84 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RNU6-911P-201ENST00000516523 104 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RNU6-1012P-201ENST00000516606 109 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RN7SKP88-201ENST00000516847 250 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RNU6-1096P-201ENST00000517089 102 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 RNU2-12P-201ENST00000517216 168 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 MIR3664-201ENST00000579074 99 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 VN1R91P-201ENST00000594377 169 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 AL359821.1-201ENST00000605519 182 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 7SK.8-201ENST00000612110 250 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 7SK.11-201ENST00000615477 250 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 7SK.13-201ENST00000622040 250 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 AC138305.3-201ENST00000624988 240 ntBASIC1.14□□□□□ -2.23
PDLIM1O00151 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
PDLIM1O00151 Y_RNA.27-201ENST00000362540 103 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 Y_RNA.101-201ENST00000363154 102 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 SNORD115-30-201ENST00000364117 82 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 RNU6-117P-201ENST00000365415 107 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PDLIM1O00151 RNA5SP482-201ENST00000391269 118 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 RNU2-54P-201ENST00000410299 190 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 RNA5SP511-201ENST00000410487 115 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 RNU7-12P-201ENST00000516030 62 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.13□□□□□ -2.23
PDLIM1O00151 AC093027.1-201ENST00000546698 429 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 AC005592.1-201ENST00000566527 1640 ntBASIC1.13□□□□□ -2.23
PDLIM1O00151 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.13□□□□□ -2.23
PDLIM1O00151 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
PDLIM1O00151 AL391987.6-201ENST00000305671 199 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 Y_RNA.58-201ENST00000362807 102 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 Y_RNA.154-201ENST00000363624 102 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 RNY3P1-201ENST00000365085 102 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 Y_RNA.338-201ENST00000365320 114 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 RNY3-201ENST00000365484 102 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 U8.16-201ENST00000391279 133 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 AL031003.1-201ENST00000404229 172 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 RPL23AP36-201ENST00000413895 458 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.12□□□□□ -2.23
PDLIM1O00151 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.12□□□□□ -2.23
PDLIM1O00151 RPL39P38-201ENST00000467018 153 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 AC092991.1-201ENST00000477176 376 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 AL163540.1-201ENST00000485382 386 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 OR9P1P-201ENST00000496431 281 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 RNU6-155P-201ENST00000516347 100 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 RNU6-1337P-201ENST00000516525 95 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 RNU6-922P-201ENST00000516753 99 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.12□□□□□ -2.23
PDLIM1O00151 AC240442.1-201ENST00000616055 283 ntBASIC1.12□□□□□ -2.23
PDLIM1O00151 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
PDLIM1O00151 RNU6-199P-201ENST00000362954 107 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 Y_RNA.446-201ENST00000384178 104 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 RNU6-321P-201ENST00000410912 106 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 RNU5A-5P-201ENST00000411054 116 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 RPEP5-201ENST00000441137 268 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 AC093850.1-201ENST00000454121 251 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 AC108729.3-201ENST00000513484 108 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 AC092447.9-201ENST00000603395 144 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 AL513534.2-201ENST00000603836 250 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 U6.92-201ENST00000636464 89 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 AC112487.2-201ENST00000637950 304 ntBASIC1.11□□□□□ -2.23
PDLIM1O00151 Y_RNA.39-201ENST00000362620 98 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 RNU6-392P-201ENST00000364926 101 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 RNU6-424P-201ENST00000384367 105 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 AL354751.2-201ENST00000415471 210 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 AL591704.2-201ENST00000421658 181 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 AC092473.1-201ENST00000441098 221 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 DYNLT3P2-201ENST00000442517 295 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 CHEK2P4-201ENST00000450340 246 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 HSPE1P13-201ENST00000451143 297 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.1□□□□□ -2.23
PDLIM1O00151 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.1□□□□□ -2.23
PDLIM1O00151 RPS29P30-201ENST00000600975 111 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 Y_RNA.804-201ENST00000615262 101 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 MIR4272-201ENST00000635924 64 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 AC068647.2-201ENST00000637380 353 ntBASIC1.1□□□□□ -2.23
PDLIM1O00151 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
PDLIM1O00151 RNU4-41P-201ENST00000364426 143 ntBASIC1.09□□□□□ -2.23
PDLIM1O00151 RNY3P14-201ENST00000384309 102 ntBASIC1.09□□□□□ -2.23
PDLIM1O00151 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.09□□□□□ -2.23
PDLIM1O00151 AL162725.1-201ENST00000435405 301 ntBASIC1.09□□□□□ -2.23
PDLIM1O00151 RNU7-152P-201ENST00000458982 64 ntBASIC1.09□□□□□ -2.23
PDLIM1O00151 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.09□□□□□ -2.23
PDLIM1O00151 RNU6-1053P-201ENST00000515930 101 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms