Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MTND3P10-201ENST00000450967 341 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.97□□□□□ -2.25
DDX39AO00148 AC069439.1-201ENST00000494739 167 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.97□□□□□ -2.25
DDX39AO00148 AC120024.3-201ENST00000603167 156 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 AC092794.2-201ENST00000620933 563 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 MIR6734-201ENST00000621166 68 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 AC008163.1-202ENST00000636004 2889 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 Y_RNA.339-201ENST00000365325 102 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 RNU6-163P-201ENST00000384396 106 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 Y_RNA.508-201ENST00000384502 114 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 RNU6-136P-201ENST00000384663 107 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 ELOCP24-201ENST00000456370 334 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 RPL17P19-201ENST00000489069 552 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 RNU6-63P-201ENST00000516690 95 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 MIR2355-201ENST00000517199 87 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 RNU6-1116P-201ENST00000517269 99 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 AC060780.3-201ENST00000589464 80 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 FAM71BP1-201ENST00000604431 523 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
DDX39AO00148 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
DDX39AO00148 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
DDX39AO00148 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
DDX39AO00148 Y_RNA.243-201ENST00000364481 109 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 RNU6-969P-201ENST00000383900 105 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 MIR526A1-201ENST00000384897 85 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.95□□□□□ -2.26
DDX39AO00148 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.95□□□□□ -2.26
DDX39AO00148 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.95□□□□□ -2.26
DDX39AO00148 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.95□□□□□ -2.26
DDX39AO00148 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.95□□□□□ -2.26
DDX39AO00148 AC245047.8-201ENST00000456455 284 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.95□□□□□ -2.26
DDX39AO00148 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 DEFB108E-201ENST00000524692 240 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.95□□□□□ -2.26
DDX39AO00148 AL096861.1-201ENST00000610899 123 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
DDX39AO00148 RMST_2.1-201ENST00000617263 136 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 MIR6788-201ENST00000618842 66 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 AC027279.3-201ENST00000625055 122 ntBASIC0.95□□□□□ -2.26
DDX39AO00148 RNU6-1301P-201ENST00000362724 104 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 SNORD68-201ENST00000363214 84 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 RNU2-64P-201ENST00000411315 191 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 AC114482.1-201ENST00000418010 247 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 RNU7-21P-201ENST00000459430 62 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 RPS26P48-201ENST00000491713 339 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 SNORA70.12-201ENST00000516084 153 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 RNA5SP220-201ENST00000516298 104 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 RNU6-358P-201ENST00000516564 75 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 AC090142.3-201ENST00000519012 385 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 MIR151B-201ENST00000584249 96 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 AC084782.3-201ENST00000612282 578 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 MIR1244-1-201ENST00000612829 85 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 MIR1244-3-201ENST00000635744 85 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 MIR1244-2-201ENST00000636449 85 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 MIR1244-4-202ENST00000636813 85 ntBASIC0.94□□□□□ -2.26
DDX39AO00148 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.94□□□□□ -2.26
DDX39AO00148 Y_RNA.88-201ENST00000363029 99 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 Y_RNA.118-201ENST00000363300 101 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 Y_RNA.796-201ENST00000364268 102 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 Y_RNA.799-201ENST00000364992 102 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 Y_RNA.336-201ENST00000365307 109 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 Y_RNA.404-201ENST00000383978 102 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 SNORD116-13-201ENST00000384408 92 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 RNU6-1105P-201ENST00000384774 107 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 MIR452-201ENST00000385020 85 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 Y_RNA.621-201ENST00000411065 96 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 AL354751.2-201ENST00000415471 210 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 MTND1P4-201ENST00000435196 415 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 RNU7-90P-201ENST00000459216 62 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 MIR2053-201ENST00000459295 91 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 snoU13.18-201ENST00000459483 104 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 AC116353.2-201ENST00000505332 712 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.93□□□□□ -2.26
DDX39AO00148 AC011712.1-201ENST00000588959 234 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 AL391903.3-201ENST00000612158 163 ntBASIC0.93□□□□□ -2.26
DDX39AO00148 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
DDX39AO00148 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
DDX39AO00148 Y_RNA.72-201ENST00000362894 103 ntBASIC0.92□□□□□ -2.26
DDX39AO00148 SNORA75.2-201ENST00000391138 150 ntBASIC0.92□□□□□ -2.26
DDX39AO00148 SNORA75.3-201ENST00000391231 150 ntBASIC0.92□□□□□ -2.26
DDX39AO00148 FCF1P9-201ENST00000412546 282 ntBASIC0.92□□□□□ -2.26
DDX39AO00148 RPS3AP1-201ENST00000413190 320 ntBASIC0.92□□□□□ -2.26
DDX39AO00148 PIGPP3-201ENST00000425307 415 ntBASIC0.92□□□□□ -2.26
DDX39AO00148 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.92□□□□□ -2.26
DDX39AO00148 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
DDX39AO00148 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.92□□□□□ -2.26
DDX39AO00148 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
DDX39AO00148 SNORD115-30-201ENST00000364117 82 ntBASIC0.91□□□□□ -2.26
DDX39AO00148 AL162725.1-201ENST00000435405 301 ntBASIC0.91□□□□□ -2.26
DDX39AO00148 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.91□□□□□ -2.26
DDX39AO00148 RNU6-408P-201ENST00000515910 100 ntBASIC0.91□□□□□ -2.26
DDX39AO00148 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.91□□□□□ -2.26
DDX39AO00148 RNU6-197P-201ENST00000516680 100 ntBASIC0.91□□□□□ -2.26
DDX39AO00148 AC023442.1-201ENST00000531247 422 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms