Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RPL7P42-201ENST00000481005 679 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 RPL17P19-201ENST00000489069 552 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 AC093534.1-201ENST00000504977 132 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 RNU6-408P-201ENST00000515910 100 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 RNU6-720P-201ENST00000516363 108 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 AC022616.4-201ENST00000522985 181 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.5□□□□□ -2.33
SMKR1H3BMG3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.5□□□□□ -2.33
SMKR1H3BMG3 AC092794.2-201ENST00000620933 563 ntBASIC0.5□□□□□ -2.33
SMKR1H3BMG3 SNORD114-27-201ENST00000363766 70 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 RNA5SP48-201ENST00000363969 126 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 MIR522-201ENST00000385071 87 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 RNU6-482P-201ENST00000391068 107 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.49□□□□□ -2.33
SMKR1H3BMG3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.49□□□□□ -2.33
SMKR1H3BMG3 MTND3P10-201ENST00000450967 341 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 AC107399.1-201ENST00000451226 265 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 RN7SKP164-201ENST00000516138 266 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 RNU7-43P-201ENST00000516554 64 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 RNU6-307P-201ENST00000516743 106 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 SNORA18.7-201ENST00000516910 131 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 AC006380.1-201ENST00000603598 186 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 7SK.10-201ENST00000621414 298 ntBASIC0.49□□□□□ -2.33
SMKR1H3BMG3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 Y_RNA.339-201ENST00000365325 102 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 SNORD115-47-201ENST00000391226 86 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.48□□□□□ -2.33
SMKR1H3BMG3 MIR2053-201ENST00000459295 91 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 SNORA59A-201ENST00000459326 152 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 SNORA25.10-201ENST00000515926 124 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 SNORD45.4-201ENST00000516629 73 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 RNU11-2P-201ENST00000516898 142 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.48□□□□□ -2.33
SMKR1H3BMG3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.48□□□□□ -2.33
SMKR1H3BMG3 AL136317.1-201ENST00000612653 226 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 MIR1244-1-201ENST00000612829 85 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 PISRT1.1-201ENST00000616930 107 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 MIR1244-3-201ENST00000635744 85 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 MIR1244-2-201ENST00000636449 85 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 MIR1244-4-202ENST00000636813 85 ntBASIC0.48□□□□□ -2.33
SMKR1H3BMG3 Y_RNA.3-201ENST00000362331 103 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 RNU6-623P-201ENST00000363143 105 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 AL031003.1-201ENST00000404229 172 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 SNORD111-201ENST00000408139 94 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 MIR1261-201ENST00000408659 82 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 MTND3P8-201ENST00000412909 339 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.47□□□□□ -2.33
SMKR1H3BMG3 MLLT10P1-201ENST00000418346 262 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 AC016907.1-201ENST00000419483 435 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 AC067940.1-201ENST00000458411 300 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 U8.19-201ENST00000459095 133 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 AC036111.3-201ENST00000526389 112 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.47□□□□□ -2.33
SMKR1H3BMG3 AC080013.6-201ENST00000606185 215 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 MIR6857-201ENST00000613267 93 ntBASIC0.47□□□□□ -2.33
SMKR1H3BMG3 Y_RNA.86-201ENST00000363020 111 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 RNU6-961P-201ENST00000363893 105 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 RNU6-733P-201ENST00000410759 104 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 MTND4P28-201ENST00000426217 387 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 HMGN2P32-201ENST00000444648 269 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.46□□□□□ -2.34
SMKR1H3BMG3 AC092989.1-201ENST00000481235 277 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 AC116353.2-201ENST00000505332 712 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 DEFB108E-201ENST00000524692 240 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 AC004817.2-201ENST00000561794 651 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 AC090517.2-201ENST00000614966 680 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 AC027514.1-201ENST00000588561 1603 ntBASIC0.46□□□□□ -2.34
SMKR1H3BMG3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SMKR1H3BMG3 MIR378A-201ENST00000362177 66 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.516-201ENST00000384541 124 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 MIR92A1-201ENST00000385233 78 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 RNU2-54P-201ENST00000410299 190 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 RNU2-61P-201ENST00000411069 191 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 AL390729.2-201ENST00000416137 156 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 SNORD123-201ENST00000459473 70 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 HMGN1P7-201ENST00000491722 313 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SMKR1H3BMG3 AC055872.1-201ENST00000570978 278 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 MIR3945-201ENST00000581853 98 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 RNU6-94P-201ENST00000607728 107 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 AC240442.1-201ENST00000616055 283 ntBASIC0.45□□□□□ -2.34
SMKR1H3BMG3 Y_RNA.101-201ENST00000363154 102 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 RNU6-99P-201ENST00000364721 107 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 SNORD50B-201ENST00000364995 70 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 MIR520E-201ENST00000384867 87 ntBASIC0.44□□□□□ -2.34
SMKR1H3BMG3 RNU1-119P-201ENST00000391122 165 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms