Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC005828.6-201ENST00000606610 232 ntBASIC1.14□□□□□ -2.23
NPIPA2E9PIF3 U2.1-201ENST00000618978 145 ntBASIC1.14□□□□□ -2.23
NPIPA2E9PIF3 AC068647.2-201ENST00000637380 353 ntBASIC1.14□□□□□ -2.23
NPIPA2E9PIF3 RNU6-626P-201ENST00000363354 107 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 RNU4-76P-201ENST00000364509 141 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 RNU6-117P-201ENST00000365415 107 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 RNU6-505P-201ENST00000384427 107 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 MIR628-201ENST00000385229 95 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 RNA5SP511-201ENST00000410487 115 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 AC015922.2-201ENST00000435593 184 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 FCF1P4-201ENST00000448326 183 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 RNU6-507P-201ENST00000516045 100 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 RNU6-875P-201ENST00000516488 106 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 RNU2-12P-201ENST00000517216 168 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
NPIPA2E9PIF3 SNORD115-30-201ENST00000364117 82 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.356-201ENST00000365475 113 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 RNU6-20P-201ENST00000384106 107 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 RNY3P4-201ENST00000384428 101 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 AC093019.1-201ENST00000443135 252 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 CHEK2P4-201ENST00000450340 246 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.632-201ENST00000459189 102 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 AL049830.1-201ENST00000468034 425 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 OR9P1P-201ENST00000496431 281 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 RNU7-12P-201ENST00000516030 62 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 AP002004.2-201ENST00000531656 154 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 MIR4659A-201ENST00000580269 81 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 AC006380.1-201ENST00000603598 186 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 AC138305.3-201ENST00000624988 240 ntBASIC1.12□□□□□ -2.23
NPIPA2E9PIF3 RNU6-324P-201ENST00000363957 106 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 RNU6-1040P-201ENST00000383974 107 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 RNU6-424P-201ENST00000384367 105 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.529-201ENST00000384586 119 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 SNORD78.2-201ENST00000391076 69 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 RNU5A-5P-201ENST00000411054 116 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 AC099799.1-201ENST00000439809 192 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 RNU6-1337P-201ENST00000516525 95 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 RNU6-1012P-201ENST00000516606 109 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 AC005176.2-201ENST00000596933 147 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 RBM11P1-201ENST00000604951 799 ntBASIC1.11□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.463-201ENST00000384271 102 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 MIR562-201ENST00000384894 95 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 AL031003.1-201ENST00000404229 172 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 AL354751.2-201ENST00000415471 210 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 MTCO2P27-201ENST00000420740 428 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 Z98949.2-201ENST00000440996 144 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 SUMO1P2-201ENST00000452524 304 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 RPS29P29-201ENST00000456396 171 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 COX6CP14-201ENST00000469580 174 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 RNU7-28P-201ENST00000516759 62 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 AC093027.1-201ENST00000546698 429 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 AC006600.1-201ENST00000572529 153 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 AC240442.1-201ENST00000616055 283 ntBASIC1.1□□□□□ -2.23
NPIPA2E9PIF3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.58-201ENST00000362807 102 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU6-199P-201ENST00000362954 107 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.154-201ENST00000363624 102 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU4-41P-201ENST00000364426 143 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNY3P1-201ENST00000365085 102 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNY3-201ENST00000365484 102 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.428-201ENST00000384078 102 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 MIR520G-201ENST00000385064 90 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU2-54P-201ENST00000410299 190 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 Y_RNA.661-201ENST00000516003 99 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU6-947P-201ENST00000516264 106 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU6-155P-201ENST00000516347 100 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU7-40P-201ENST00000516397 64 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU6-966P-201ENST00000516479 104 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 AL513534.2-201ENST00000603836 250 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 AC104985.2-201ENST00000620598 500 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 U6.92-201ENST00000636464 89 ntBASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
NPIPA2E9PIF3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.187-201ENST00000363918 113 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 Y_RNA.446-201ENST00000384178 104 ntBASIC1.08□□□□□ -2.24
NPIPA2E9PIF3 SNORD116-13-201ENST00000384408 92 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms