Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNU6-1031P-201ENST00000384773 107 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 RNA5SP482-201ENST00000391269 118 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 AC016909.1-201ENST00000415916 166 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 AC116353.2-201ENST00000505332 712 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.655-201ENST00000515919 96 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 RAB11AP2-201ENST00000545905 639 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 RPL21P9-201ENST00000556149 474 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 MIR3684-201ENST00000579779 74 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 AL117336.2-201ENST00000602435 335 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 AC012557.2-201ENST00000605919 418 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 SNORA1B-201ENST00000362535 133 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 U3.8-201ENST00000363675 217 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU1-36P-201ENST00000365130 165 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU6-30P-201ENST00000384561 107 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU6-95P-201ENST00000384697 107 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 MIR514A2-201ENST00000385131 88 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 MIR514A3-201ENST00000385132 88 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 MTND1P2-201ENST00000430604 821 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 HSPE1P9-201ENST00000440046 311 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC048334.1-201ENST00000477975 159 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU6-322P-201ENST00000516010 103 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 SNORD111.1-201ENST00000516421 86 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC091144.1-201ENST00000519573 138 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AP003327.1-201ENST00000529684 127 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC019288.1-201ENST00000557918 224 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC100830.2-201ENST00000581636 240 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC068700.1-201ENST00000565862 3754 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 MTND5P16-201ENST00000460269 1703 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU6-1084P-201ENST00000362498 107 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU6-1252P-201ENST00000363054 104 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU6-534P-201ENST00000364877 106 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU6-407P-201ENST00000365280 104 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 SNORD116-29-201ENST00000384516 83 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.577-201ENST00000384794 101 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 MIR548B-201ENST00000385247 97 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AL451046.2-201ENST00000403074 277 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 MRPL35P1-201ENST00000404272 572 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 STAG3L5P-204ENST00000443759 179 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RPL30P10-201ENST00000488148 337 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC114811.1-201ENST00000507207 168 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNA5SP168-201ENST00000516642 112 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 RNU7-172P-201ENST00000517125 64 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC015688.6-201ENST00000577737 104 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC005899.2-201ENST00000584353 90 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC120024.3-201ENST00000603167 156 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC092794.1-201ENST00000612734 582 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC002553.4-201ENST00000616896 331 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 AC005562.2-201ENST00000618264 111 ntBASIC0.41□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.142-201ENST00000363491 102 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 RNU6-454P-201ENST00000364292 107 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.319-201ENST00000365138 92 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 SNORD116-11-201ENST00000383882 92 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 RNU6-1013P-201ENST00000384180 107 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 SNORD89-201ENST00000390981 114 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 SNORD115-47-201ENST00000391226 86 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 RPS3AP52-201ENST00000435639 297 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 RPL39P39-201ENST00000455840 151 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 snoU13.6-201ENST00000458785 104 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 RPS26P48-201ENST00000491713 339 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 MTND5P5-201ENST00000503764 376 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 RNU6-358P-201ENST00000516564 75 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 RNU6-58P-201ENST00000517143 103 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 TPRKBP2-201ENST00000565969 475 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 AL357312.1-201ENST00000603879 298 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 AC097065.2-201ENST00000608159 533 ntBASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.4□□□□□ -2.34
COL6A6A6NMZ7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 RNU6-1123P-201ENST00000362347 106 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 SNORD50.1-201ENST00000362987 71 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 SNORD38C-201ENST00000384381 69 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 MIR100-201ENST00000385259 80 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 FCF1P9-201ENST00000412546 282 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 AL590632.1-201ENST00000424289 371 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.635-201ENST00000459041 101 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 RPL39P38-201ENST00000467018 153 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 RNU6-917P-201ENST00000516294 104 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 RNA5SP404-201ENST00000517118 132 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 AC004812.1-201ENST00000540773 146 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 AC093023.1-201ENST00000547375 507 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 MIR5695-201ENST00000579717 85 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 AC006380.1-201ENST00000603598 186 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 AL022345.2-201ENST00000606307 135 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 MIR1244-1-201ENST00000612829 85 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 AC022306.2-201ENST00000617563 647 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 uc_338.17-201ENST00000619633 179 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 SNORD3E-202ENST00000627253 216 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 MIR1244-3-201ENST00000635744 85 ntBASIC0.4□□□□□ -2.35
COL6A6A6NMZ7 MIR1244-2-201ENST00000636449 85 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms